Protein Model on 5m59_F_1_E_1 (TEMPLATE: 5m59 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RIGI_HUMAN) F 1 (E) polymer(polypeptide(L)) [1740 aa] Pre-mRNA splicing helicase-like protein :G0S0B9_CHATD
2 b E 1 (F) polymer(polypeptide(L)) [265 aa] Putative pre-mRNA splicing factor :G0SFL3_CHATD 298N(P) 299Q(L) 324I(L) 325S(T) 326G 347T 349Q(E) 350I(K) (identity: 25.0 %/31.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5m59_F_1 identity=31.9%
queryA       259:NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL: 351
                :*   ***** *** *  *       *     **       * *  *        *   * *  *  *  *    *         *       *  **   :
5m59_F_1     125:NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFGKRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKW: 220
SecStr          : EEEE  TTS  HHHHHHHHHHHHHT-T SSSS   TTT EEEEE SSHHHHHHHHHHHHHHHTTTT  EEE  S---GGGTTTSHHHH SEEEE HHHH:    
ExpBur          :ebbbbbbeebebebbbbbbbbbbbee-eeeeeeebeeeebbbbbbbbeeebbeebbeebbebbeebebebbebee---eebeebeebbebbbbbbebeeb:    
Contact         :                                              bb                        bbb                    b bb 

queryA       352:VNNLKKGT-IPSLSIFTLMIFDECH: 375
                :     * * *       * * ** *:
5m59_F_1     221:DVITRKATDISYTNLVRLIIIDEIH: 245
SecStr          :HHHHHHTSSHHHHTTEEEEEEETGG:    
ExpBur          :bbbbbeebbeeebeebebbbbbbbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123