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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [672 aa] | Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN | |
2 | b | Y 1 (E) | non-polymer(ETF) | TRIFLUOROETHANOL | 666K 668N 669Q 872D 888K (identity: 100.0 %/98.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5f9f_E_1 identity=98.7% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341 :****************************************************************************************************: 5f9f_E_1 12:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 111 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHHSS SS EEEE SSHHHHHHHHHHHHHHSTTTT EEEE GGG SSS HHHHHHT : ExpBur :eeeebbebbbebbeeeebbbbbbebebeeeebbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeebebebebbbeeeeeeeebeeebeeb: queryA 342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441 :****************************************************************************************************: 5f9f_E_1 112:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 211 SecStr :SEEEE HHHHHHHHHHTSS GGG SEEEEETGGG STT HHHHHHHHHHHHHHTT S EEEEEES TT SHHHHHHHHHHHHHHTT EEE : ExpBur :bbbbbbbebbbebbeeeebeebeebebbbbbbbbebeeebbbbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbebbbbbbbe: queryA 442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541 :*************************************************** ****************************************: 5f9f_E_1 212:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 311 SecStr : TTHHHHHTTS EEEEEE S HHHHHHHHHHHHHHHHHHHH --------- TTSHHHHHHHHHHHHHHTT SSHHHHHHHHHHHHHH: ExpBur :beeeeebbeeebeebebeeeebeebeeeebeebbbebbeebeebbeeebee---------eebbeeebeeebeeeebebbeeeeeeeeebeebbbbbbbb: queryA 542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641 :****************************************************************************************************: 5f9f_E_1 312:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 411 SecStr :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHT TTS HHHHHHHHHHHHHHHH TT EEEE S HHHHH: ExpBur :bebbeebbbbbebbebbbbebbbeebeebbeebbeeeeeeebbebbeebeeebeebeebeeeeebebebbebbbebbeebbeeeeebbbbbbbeeeebbe: queryA 642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741 :****************************************************************************************************: 5f9f_E_1 412:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 511 SecStr :HHHHHHHH GGGTT EEEE TTSS S HHHHHHHHHH SSSSS SEEEES SSS S S SEEEEES HHHHHHGGGGG STT EEEEE: ExpBur :bbeebbeebeebeebebbbbbeeeeeeeeeebeeeeebebeebbeeeeeebbbbbbeeebbbeebeebebbbbbbbeeebbebbbbbbbbbeeebebbbb: Contact : b bb queryA 742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841 :****************************************************************************************************: 5f9f_E_1 512:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 611 SecStr :ES SHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHT B S EEEEETTT EEEETTTEEEETTTEEEE STTGGGS: ExpBur :bbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeeeeeeeeeeeeeeebbbbbbbbbeebbebeebbbbeeeebbbeeeebeee: queryA 842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922 :*********************************************************************************: 5f9f_E_1 612:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 692 SecStr :EEEEE SS TT EEEEEEE GGG EEEEEEEETTEEEEEE GGGEEEEETTT EE SSGGG B EE TT : ExpBur :beeeebeeeeeeeebbbebbbbbebeebebbbbbebbeeebebbbbebebbbbbbeeeeebeeeeebeebebbeeebeeee: Contact : b b |