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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [469 aa] | ATP-dependent RNA helicase, putative :Q8TZH8_PYRFU |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1wp9_D_1 identity=28.8% |
queryA 241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IV: 338 : ** ** * * * * *** *** * * * * *** * * * * * * * * * : 1wp9_D_1 8:IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAW: 99 SecStr :H HHH-HHHHHHGGGS EEEE TTS HHHHHHHHHHHHHHHS---- S EEEE SSHHHHHHHHHHHHHHB S GGGEEEE S--- S HHHHHHHH: ExpBur :beeeebb-eebbeebeeeebbbbbeeebbbbebbbbbbbbbbeee----eebbbbbbbeeebbeebbeebeebbebeeeebbbbbe---eeeeeebeebb: queryA 339:ENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 438 : * *** * * * * ** * *** * * * * * ** ******* * * * * : 1wp9_D_1 100:ARAKVIVATPQTIENDLLAGRI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK--------IMEVINNLGIEH: 184 SecStr :HH SEEEE HHHHHHHHHTTS - TTS SEEEEETGGG STT HHHHHHHHHHHH---- SS --EEEEES S SSHHH--------HHHHHHHHT E: ExpBur :eebebbbbbbebbeebbeeeeb-ebeebbbbbbbebeebbeeebbbbbbebbeee----beeeb--bbbbbeebeeeeee--------eeebbeebbbee: queryA 439:IATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC: 535 :* * * * * ** * * * * * * * * : 1wp9_D_1 185:IEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLREMLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR--: 270 SecStr :EEE TTSTTTGGGS EEEEEE HHHHHHHHHHHHHHHHH-------HHHHHHHTSSS TTS HHH-----HHHHHHHHHHHHTTT STT--: ExpBur :bbebeeebeebeeebeeeebeeeebebeebbeebbebbbebbeeb-------bebbbeeebbeeeebebeeeb-----beebbeebeeebeeeeeeee--: queryA 536:KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVK: 635 : * ** * * * * * * * * ** * * * * * : 1wp9_D_1 271:-GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAXXXKASKEIFSDKRMKKAISLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTN: 369 SecStr :-THHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHH --- HHHHHHTSHHHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHHH TT EEEE S: ExpBur :-ebeeebebbeebbebbebbbbbbbebbeebbeebeeebee---ebbeebbeeeebeebeebbeebeeeebbbbbbeebbebbeebbeeeeebbbbbbbe: queryA 636:TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-: 730 : * * * ** * ** *** * * * * * **** ** * ** ** * * ** *** : 1wp9_D_1 370:YRETAKKIVN--------ELVKDGIKAKRFXXXXXXXXXXXXXXREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRT: 460 SecStr : HHHHHHHHH--------HHHHTT EEE -------------- HHHHHHHHH-HHTS SEEEE GGGGGGGGSTT EEEESS HHHHHHHHHHTTS: ExpBur :eeebbeebbe--------bbeeeebebeeb--------------eeeeebbebb-eeeebbbbbbbeebeebbebeebbbbbbbbbbeebbebbeebbbe: queryA 731:GRARGSKCFLLTSNA: 745 :** * : 1wp9_D_1 461:GRHMPGRVIILMAKG: 475 SecStr : S SEEEEEEETT: ExpBur :eeeebeebbbbbbee: |