Protein Model on 4nqk_D_1_J_1 (TEMPLATE: 4nqk )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) D 1 (D) polymer(polypeptide(L)) [188 aa] Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2 b J 1 (J) polymer(polypeptide(L)) [73 aa] Ubiquitin :UBC_HUMAN 4E 7R 8S 11A 12F 14D 15Y 91S 92W 93D 94F 95K 98E (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4nqk_D_1 identity=100.0%
queryA         1:MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFLLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKL: 100
                :****************************************************************************************************:
4nqk_D_1       4:MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFLLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKL: 103
SecStr          : HHHHHHHHHHTHHHHHHH  HHHHHHHHGGGS HHHHHHHHHHHHHH HHHHHHHHHHHHHT  STTHHHHHHHHHHHHT TTHHHHHHTT  HHHHHH:    
ExpBur          :eeeeeeeebeeeeeebeebbbbbbbbeebeeebeeebbeebeebeeeeeeeebbebbbebbbebeeeebbebbbebbeebebeebbebbeeeebeebeeb:    
Contact         :   b  bb  bb bb                                                                           bbbbb  b  

queryA       101:EEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNKFSELWIV: 188
                :****************************************************************************************:
4nqk_D_1     104:EEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNKFSELWIV: 191
SecStr          :HHHHHHHHHHHHHHHHH  HHHHHTGGGTTS HHHHHHHHHHHHHT HHHHHHHHHHHHHT   TTHHHHHHHHHHHS  SGGGGS  :    
ExpBur          :eebbebbeebeeebbebbebeebbeebeebbbeebbeebeebbeeeeeeebbebbbebbebbbbeebbebbbebbeeeeeebbeebee:

Input Residue Numbers for Focused Sites

ex) 2,15,123