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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [188 aa] | Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN | |
2 | b | I 1 (I) | polymer(polypeptide(L)) [71 aa] | Ubiquitin :UBC_HUMAN | 28Y 31P 32W 67E 68G 71R 75D 78D 79H 86Y (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4nqk_D_1 identity=100.0% |
queryA 1:MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFLLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKL: 100 :****************************************************************************************************: 4nqk_D_1 4:MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFLLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKL: 103 SecStr : HHHHHHHHHHTHHHHHHH HHHHHHHHGGGS HHHHHHHHHHHHHH HHHHHHHHHHHHHT STTHHHHHHHHHHHHT TTHHHHHHTT HHHHHH: ExpBur :eeeeeeeebeeeeeebeebbbbbbbbeebeeebeeebbeebeebeeeeeeeebbebbbebbbebeeeebbebbbebbeebebeebbebbeeeebeebeeb: Contact : b bb bb b b bb b queryA 101:EEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNKFSELWIV: 188 :****************************************************************************************: 4nqk_D_1 104:EEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNKFSELWIV: 191 SecStr :HHHHHHHHHHHHHHHHH HHHHHTGGGTTS HHHHHHHHHHHHHT HHHHHHHHHHHHHT TTHHHHHHHHHHHS SGGGGS : ExpBur :eebbebbeebeeebbebbebeebbeebeebbbeebbeebeebbeeeeeeebbebbbebbebbbbeebbebbbebbeeeeeebbeebee: |