Protein Model on 8hf1_D_1_C_1 (TEMPLATE: 8hf1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RIGI_HUMAN) D 1 (D) polymer(polypeptide(L)) [1561 aa] Dicer-2, isoform A :A1ZAW0_DROME
2 b C 1 (C) polymer(polypeptide(L)) [126 aa] LD06392p :Q9VLW8_DROME 438V 439I(M) 440A(V) 441T(S) 737K (identity: 40.0 %/29.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8hf1_D_1 identity=29.7%
queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335
                :*** *** *        * *   *** *****  *        *  *    **   *  *      **            *  *   *    *      *:
8hf1_D_1       6:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 104
SecStr          :   HHHHHH-HHHHHHS EEEE  SSHHHHHHHHHHHHHT TTSSS GGGT  EEEEEESSHHHHHHHHHHHHHH SS EEEE GGGTGGG  HHHHHHH:    
ExpBur          :ebeebbeeb-beebeebbbbbbbeeeebbbbbbbbbbeebeeebeeebeeebebbbbbbeeeebbebbbebbeeebebebbebbeeeebeeeeeeebeeb:    

queryA       336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411
                :     *     * *         *   **     * ****     **    *  *    *        ** * ***                        :
8hf1_D_1     105:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 195
SecStr          :--HHH SEEEEEHHHHHHHHHT-TSS GGGEEEEEESSGGG  TT HHHHHHHHHTTS ST------T  EEEEEES S  SS  TTHHHHHHHHHHHTT:    
ExpBur          :--beebbbbbbbbebbbebbbb-eebebebbbbbbbbbbbbbeeeeebbbbbbbbeeeeee------eebebbbbbbbbbeeeebeebeeebeebbbbbb:    

queryA       412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500
                :     * * *       *     *     *     *     ***           *    *     *  *  *   **        *   * * *    *:
8hf1_D_1     196:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 286
SecStr          :SEEE   SHHHHHHHHTT-----S   EEEEEEE   ----    HHHHHHHHHHHHHHHHHHT      S  B TTSSSB   HHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbeeeebeeebeee-----beebeeeeeebeee----eeeeebbeebbebbeebbeebeeeebeeeeeeeeeebeeeeeeeebbebbebbebbeeb:    
Contact         :                             bbbb                                                                   

queryA       501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594
                :  * *       *         *       *    *              **   *  *       * *             *          ***    :
8hf1_D_1     287:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 369
SecStr          :HHHHBSHHHHHHHHHH---HHHHHHHHHH  SHHHHHH---------HHHHHHHHHHHHHH-HHHHHHTTGGG   HHHHHHHHHHHTB HHHHHH----:    
ExpBur          :beebbbbbbbbbbbbb---bbbbeebeeebebeebeeb---------beebbebbeebeee-beeebeebeeebeeeeebbbebbeebbbbbbeeb----:    

queryA       595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687
                :  * *         **  * *                 **  *         * * *   * *   * *    **          *    **     *  :
8hf1_D_1     370:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 450
SecStr          :--HHHHHHHTSS  GG--G  --------------EEEE SSHHHHHHHHHHHHHHHTT TTTTTT  EEEE  SS   S SS  SS    S HHHHHH-:    
ExpBur          :--bebbeeebeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbebeeeebeebeeeeeeeeeeeebbebbe-:    

queryA       688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744
                : *  *  *  **  ****   ** *     *       *  ** *    *  * *  :
8hf1_D_1     451:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 507
SecStr          :TTS SEEEESSSTTSS      SEEEE S    HHHHHHHHHH  STT EEEEEEEG:    
ExpBur          :eeebbbbbbbebbbbbbebeebbbbbbbbebeebbbbbbbbebbebeebebbbbbbe:    
Contact         :                                                 b                                                  


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