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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | C 1 (D) | polymer(polypeptide(L)) [671 aa] | RETINOIC ACID INDUCIBLE PROTEIN I :D3TI84_ANAPL |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4a2q_C_1 identity=50.7% |
queryA 2:TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFLLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLE: 101 :* **** ** * * * * * * * * ** *** * * ***** *** *** ** **** *** * ****: 4a2q_C_1 5:TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAVLQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLE: 103 SecStr : HHHHHHHHT HHHHTT GGGTSTT TTTS- HHHHHHHHHHHTT HHHHHHHHHHHTTT TTHHHHHHHHHHHHT HHHHHHHHTT SHHHHHH: ExpBur :eeeebeebeeeeebbeebbbbbbbbeebeeeb-eeebbeebeebeeeebeebbeebbebbbeeeeeebbebbbebbeebebeebbebbeeeebeebeebe: queryA 102:EYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RNKFSELWIVEKGIKDVETEDL: 200 : * **** * * * *** ***** ** ** ** *** ***** *** * *** **** : 4a2q_C_1 104:LHRQLLKRIEATM-LEVDPVALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYYRASELW--------------: 188 SecStr :HHHHHHHHHGGGS-TT HHHHHHHHTTTS HHHHHHHHHHHHHT HHHHHHHHHHHHTT TTHHHHHHHHHHHHT HHHHHTT--------------: ExpBur :eebebbebbbbbb-bebebeebbeebeebbbeebbeebeebbeeebebbbbbebbebbbbbbeeebbebbbebbeeebeeebbebb--------------: queryA 201:EDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNLYSPF-----------------------------------------------------------: 241 : : 4a2q_C_1 189:-----------------------------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 247 SecStr :----------------------------------------- ----------------------------------------------------------: ExpBur :-----------------------------------------e----------------------------------------------------------: queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341 :* * ** *** ** *** ****** ****** ****** * * * **** * ******* ** *** ** * **** ** * : 4a2q_C_1 248:KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDS: 347 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHHT SS EEEE SSHHHHHHHHHHHHHHHGGGT EEEE ----- HHHHHHT : ExpBur :eeeebbebbbebbeeeebbbbbbeeebebeebbbbbbbebbeeeeeeeebbbbbbbbeeeebeebeeebeeebeeeeeebeeeeee-----ebeeebeeb: queryA 342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441 :*** ******* ** **************** **** * ** ** * *** ********* *** * ** ** ** * *: 4a2q_C_1 348:DIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAIST: 446 SecStr :SEEEE HHHHHHHHHSSS GGG SEEEEETGGG STTSHHHHHHHHHHHHHH-TT EEEEEES TT SHHHHHHHHHHHHHHHT SEEE : ExpBur :ebbbbbbebbbebbeeeebeebeebbbbbbbebeebeeeebbbebbeebbebee-eeeeeebbbbbbbeebebeebeeeeebbeebbebbbebbbebbbb: queryA 442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541 :* * ** ** * * ** * ** ** ** * * **** ** *** * * * ** ****** *** : 4a2q_C_1 447:VRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC: 545 SecStr : TTHHHHHHHS EEEEE S HHHHHHHHHHHHHHHHHHH ------------- SSHHHHHHHHHHHHHHHH SSHHHHHHHHHHHHHH: ExpBur :beeeeeebeeeeeebebeeeebeeeeeeebbebbeebbeebbeebeee-------------eeeeeebbeebeebbeebeeeeeeeeeebbeebebbbbb: queryA 542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641 :* ************* ** *** ** ** ** * ** ** * ** ** * * ******* * ** * ** * * ** ****** : 4a2q_C_1 546:TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVS: 645 SecStr :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHHHHHH SS HHHHHHHHHHHHHHHH SS EEEE SSHHHHH: ExpBur :bbbbbbbbbbbbbbebbbeebbbeebeebbebbeebeeeebbeebbeebeeeeeebeeebeeeeeebbbbeebbebbbebbeeeeebebbbbbebebbbe: queryA 642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741 :*** * ** * *** * * **** ***** **** *** **** **** * : 4a2q_C_1 646:ALKKCMEENPILNYIKPGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATXXXXXXXXXVQCNLVVLYEYSGNVTKMIQVXXXXXXXGSKCILV: 745 SecStr :HHHHHHHT STTTT EE ---------------------------- SEEEE --------- SEEEEES S SHHHHT ------- EEEE: ExpBur :bbeebbeebeebeebebbee----------------------------eeebebbe---------eeeebbbbbbeeeebeeeeee-------eeebbbb: queryA 742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFI: 790 :** * * * * *** *** * *** * ** * * : 4a2q_C_1 746:TSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVL: 794 SecStr :ES SSHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHT : ExpBur :beeeeeeeebeeeeeeeebbeebbeebeeeeeeebeeebeebbeeeeee: |