[pdbjlvh2]Protein Model on 5f9h_C_1_K

Protein Model on 5f9h_C_1_K_1 (TEMPLATE: 5f9h )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [647 aa]	Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2	b		K 1 (K)	polymer(polypeptide(L)) [637 aa]	Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN	881T 920P 921A (identity: 100.0 %/94.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5f9h_C_1 identity=94.9%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
5f9h_C_1      11:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 110
SecStr          :    HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHTS TT    EEEE SSHHHHHHHHHHHHHHHTTTT  EEEE TTT TTS HHHHHHT:    
ExpBur          :eeeeebbebbbeebeeeebbbbbbebebebeebbbbbbbebbeebeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeebeeeebeeebee:    

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
5f9h_C_1     111:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 210
SecStr          : SEEEE HHHHHHHHHHTSS  GGG SEEEEETGGG STT HHHHHHHHHHHHHHSS      EEEEEES    TT SSHHHHHHHHHHHHHHTT SEEE:    
ExpBur          :bbbbbbbbebbbebbeeeebeebeebebbbbbbbbebeeeebbbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbebbbbbbb:    

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :****************************************************         ***************************************:
5f9h_C_1     211:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 310
SecStr          :   TTHHHHTTTS   EEEEEE    S  SHHHHHHHHHHHHHHHHHHH   ---------  TTSHHHHHHHHHHHHHHTS   SSHHHHHHHHHHHHH:    
ExpBur          :bbeeeeebbeeebeebeeeeeebeebeeebbbebbeebbbbbeebeeeeeee---------eeeeeeebeeebeeeeeebbeeeeeeeeebbebbbbbbb:    

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
5f9h_C_1     311:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 410
SecStr          :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHSHHHHHHHHS GGG  HHHHHHHHHHHHHHHH TT  EEEE S HHHH:    
ExpBur          :bbebbeebbbbbebbebbbbebbbeebeebbeebeeeeeeebbeebbeebeeeeeebeebeeeeebebebbebbbebbeebbeeeeebbbbbbbeeeebb:    

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :**************************                    ******************************************************:
5f9h_C_1     411:DALKNWIEGNPKLSFLKPGILTGRGKXXXXXXXXXXXXXXXXXXXXASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 510
SecStr          :HHHHHHHHT GGGTT  EEEE  S  --------------------  SS SEEEES  SSS S  S  SEEEEES    HHHHHHHGGGG STT EEEE:    
ExpBur          :ebbeebbeebeebeebebbeeeeeee--------------------eeeeebbebbbeeebbeeeeeebebbbbbbbeeebbebbbbbbbbbeeebebbb:    

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :*****************************************************      *****************************************:
5f9h_C_1     511:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSXXXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 610
SecStr          :EESSSHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHT ------  B S EEEEETTT  EEEETTSEEEETTTEEEE SSSGGG:    
ExpBur          :bbbeebbbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeee------eeeeeebbbbbbbbbbebbebeebbbbeeeebbbeeeebee:    

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :**********************************************************************************:
5f9h_C_1     611:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 692
SecStr          :SEEEEE SS  EETTEEEEEEEEE GGG   EEEEEEEETTEEEEEE GGGEEEEETTT  EE  SSTTT  B  EE  TT :    
ExpBur          :ebeeeebeeeeeeeebebebbbebeeeebebebbbebebeeeebbbbebebbbbbbeeeeebeeeeebeebebeeeebeeee:    
Contact         :                                        b                                      bb

Protein Model on 5f9h_C_1_K_1 (TEMPLATE: 5f9h )

Input Residue Numbers for Focused Sites