Protein Model on 8g7t_C_1_E_1 (TEMPLATE: 8g7t )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) C 1 (C) polymer(polypeptide(L)) [616 aa] Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2 b E 1 (X) polymer(polyribonucleotide) p3dsRNA24a 298N 299Q 300I 301P 325S 326G 347T 349Q 353N 418K 507Q 511Q 514V 518K 546R 635K 637R 698S 851K 853F 854S (identity: 100.0 %/90.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8g7t_C_1 identity=90.5%
queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
8g7t_C_1     241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
SecStr          :    HHHHHHTTTTTTTS B  B SSSHHHHHHHHHHHHHHHHT  TT     EEE  SHHHHHHHHHHHHHHTTTTT  B    TTT TT  HHHHHHH:    
ExpBur          :eeeeebbebbbeebeeeebbbbbbeeeebbbebbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeebeeebbbeeebeeeebeebbee:    
Contact         :                                                         bbbb                       bb              

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
8g7t_C_1     341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
SecStr          : SB    HHHHHHHHHHSSS  GGG SBEEEETGGGTTSS HHHHHHHHHHHHHTTS   S  B  EEBS     S  SHHHHHHHHHHHHHHHT  B  :    
ExpBur          :bbbbbbbbebbbebbeeeebeebbebebbbbbbbeebeeeeebbebbeebbeeeeeeeeeeebbbbbbbeebebeebeeeeebbeebbebbbbbbbbbbb:    
Contact         :      b b   b                                                                b                      

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :****************************************************************************************************:
8g7t_C_1     441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
SecStr          :  SS HHHHTTS    B  EEE    S  HHHHHHHHHHHHHHHHHTTT SS TTSS SS   TTSHHHHHHHHHHHHHTTS   TTSSSHHHHHHHHHH:    
ExpBur          :ebeeeeeeeeeeeeeeeeeeeeeeebeeeebbebbbebbeebbebbeeebeebeeebeeeebebeeeebbebbeebbebbbeeeeeeeeebeebbbbbbb:    
Contact         :                                                                  b   b  b   b                      

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
8g7t_C_1     541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
SecStr          :HHHHHHHHHHHHHHHHHS THHHHHHHHHHHHHHHTT   HHHHHHHHHHHHSHHHHHHHHH SSS  THHHHHHHHHHHHHHH S   EEEE S HHHH:    
ExpBur          :bbbbbeebbebbebbeebbbebbbeebeebbeebeeebeeebbeebbeebeeebeebeebbeeeebbbebbebbbebbeebbeeeeebebebbbeeeebb:    
Contact         :     b                                                                                        b b   

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :******************                                *********          *********                 *****:
8g7t_C_1     641:DALKNWIEGNPKLSFLKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNILIATSVXXXXXXXXXXNLVILYEYVXXXXXXXXXXXXXXXXXSKCFL: 740
SecStr          :HHHHHHHSSSSS  S   --------------------------------  EE  S  ---------- EEEEES  ----------------- EEEE:    
ExpBur          :ebbeebbeeeeebeebee--------------------------------eebeeeeee----------ebbbbbbee-----------------eebbb:    
Contact         :                                                         b                                          

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :*****************************************************      *****************************************:
8g7t_C_1     741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSXXXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
SecStr          :EESSTHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHH ------      EEEE SSS  EEEETTSEEESSSS EEE  SSSSS:    
ExpBur          :bbeeeebbeebeeeeebeebbeebbeebeeeeeeebeeebeebbeeebeeeee------eeeeeebbbbbbbbbeebbebeebebbeeeebbbeeeebee:    

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA: 921
                :*********************************************************************************:
8g7t_C_1     841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA: 921
SecStr          :SEEEEE SS    SS    EEEEE SSS   EEEEEEE SSSEEEEE STT EEEESSS  EE  SSGGG     EE    :    
ExpBur          :bbeeeebeeeeeeeebebebebbbeeeebebebbbbbebeeeebbbbebebbbbbbeeebebeeeeebeebebbeeebeee:    
Contact         :          b bb

Input Residue Numbers for Focused Sites

ex) 2,15,123