[pdbjlvh2]Protein Model on 7nga_C_1_D

Protein Model on 7nga_C_1_D_1 (TEMPLATE: 7nga )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	C 1 (A)	polymer(polypeptide(L)) [650 aa]	Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE
2	b		D 1 (A)	non-polymer(ZN)	ZINC ION	810C 813C 864C 869C 871H(Q) (identity: 80.0 %/36.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7nga_C_1 identity=36.2%

queryA       244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :* ** * * **  *** *** *** *** *   *   ** *  *    ***    *     **     *  *     **  * ** *         *   :
7nga_C_1     310:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 408
SecStr          : HHHHHHHGGGGGT   EEE  TTS HHHHHHHHHHHHHHHHHHTTS   EEEE SSHHHHHHHHHHTHHHHHTT-TS   B  SSS  SS HHHHHHH :    
ExpBur          :eebbeebbebbbeeebbbbbbeeebebeebbbbbbbebbeebeeeeeebbbbbbbeeebbbeebeeebbbebbee-ebebbbbbeeeeeeeebbebbeee:    

queryA       342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428
                :* ** * *** *   **  *      ** * * * **** * *   ** **  ** ***             ****  ***** *** **   **   * :
7nga_C_1     409:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 508
SecStr          :SEEB  HHHHHHHHHHHHSTT     TTTSSEEEEE GGG SSS HHHHHHHHHHHHHHHHHHHHHH S      EEEEEES     S SSHHHHHHHHH:    
ExpBur          :ebbbbbbeebbebbeeeeeeeeeebebbebbbbbbbbbbebeeebebbebbbbbbebbbebeeeeeeeeeeeeebbbbbbbeebebeebeeeeebbebbb:    

queryA       429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528
                :  ** ***  * *** **  *      * * *          **      *                        **** ****     *        * :
7nga_C_1     509:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXXNPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 594
SecStr          :HHHHHHT S     STTHHHHHHHS          ----- HHHHHHHHHHHHHHHHHT    S---------- SSSHHHHHHHHHHHHHH----HHHT:    
ExpBur          :ebbbbbbbeebeebeeeeeebeeebeeeeeeeeee-----eebeeebeebbeebeebbebeeee----------eebeeebbebbeebbeeb----beee:    

queryA       529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------------------------DEIEQDLTQRFEEKLQELE: 598
                :    * *        ****** ** *    ** **   *  *        *                              **    *   *      * :
7nga_C_1     595:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXXXXXXXXXXXXXXXXXXXXXXLDETDEFLMNLFFDNKKMLK: 688
SecStr          : TTTSHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHH -------------------------  HHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeebbb------bbbbeebbbbbebbeebbbebbbebbeebbeeeeebbebeee-------------------------eeebbeebbebbeeeeeebe:    

queryA       599:SVSRDPSNENPKLEDLCFILQEEYHLNP-ETITILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILI: 695
                :     *     **  *     *           * * ***    **  **  * *      *   * * *       **   **     *   *  * **:
7nga_C_1     689:KLAENPKXXXEKLIKLRNTILEQFTRSEXXSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLI: 787
SecStr          :HHHH   --- HHHHHHHHHHHHHHH  --  EE   SSHHHHHHHHHHHHH HHHHHHT  EE        TT     HHHHHHHHHHHH-HTSSSEE :    
ExpBur          :eebeeee---eebeebeebbbebbeebe--eebbbbbeebebbebbbebbeebeebeeeebeeebbbbeeeeeeeebbeeeebeebbeebe-eeebbbbb:    

queryA       696:ATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR: 791
                :** ** ** **  ** ** *  *             **  *   * *         *  *   ****   * * *         ***  *     **   :
7nga_C_1     788:ATTVAEEGLDIKECNIVIRYGLVTXXXXXXXXXXXARADESTYVLVTXXXXXXXXREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMK: 887
SecStr          : SSTTTTTS   S SEE  BS   ----------- BTTB     B -------- HHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbebbeebbebeebebbbbbebee-----------bbeeeebbbbbe--------ebeeeeeeeebbeebbeebeeeeeeebeeebeebbeebbeebeee:    

queryA       792:DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-KPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKI: 889
                :      *   *      ***  *  * *      ***  *       **     *                 * *    *   **     *    *  **:
7nga_C_1     888:VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXXNGEIIC---KCGQAWGTMMVHKGLDLPCLKI: 984
SecStr          :HHHHHHHS    SS   EEESSS  B   SSSEEEETTTEEEE STTTTTT EEE   ----------- EEEE ---TTS EEEEE EETTEE  EE G:    
ExpBur          :eeeeeeeeeeeeeeebebbbbbbeeebbebeebebbeeeebbbbeeebeeebeebeee-----------eeebbb---ebbbbbbebbebeeeebbbbeb:    
Contact         :                   b  b                                                   b    b b                  

queryA       890:ESFVVEDIATGVQTLYSKW: 908
                :  ***          * **:
7nga_C_1     985:RNFVVNFKNNSPKKQYKKW:1003
SecStr          :GGEEE  TT    B  SSG:    
ExpBur          :ebbbbebeeeeebeeeeeb:

Protein Model on 7nga_C_1_D_1 (TEMPLATE: 7nga )

Input Residue Numbers for Focused Sites