CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | C 1 (A) | polymer(polypeptide(L)) [1541 aa] | Dicer-2, isoform A :A1ZAW0_DROME | |
2 | b | B 1 (D) | polymer(polyribonucleotide) | dsRNA | 298N 299Q(T) 300I(V) 325S(D) 349Q 482T(S) 483E(K) 484S 485L 492D(Q) 635K(E) 636T(R) 637R 662T(V) 663G 664R 665G(N) 697T(S) 698S 699V (identity: 45.0 %/29.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7w0e_C_1 identity=29.7% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335 :*** *** * * * *** ***** * * * ** * * ** * * * * *: 7w0e_C_1 7:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 105 SecStr : TTHHHH-HHHHHHS EEE TTS HHHHHHHHHHHT SS SS GGGT EEEEE S HHHHHHHHHHHHHT SS EEEE TTTTTTT HHHHHHH: ExpBur :eeeebbeeb-beebeebbbbbbbeeebebebbbbbbbeebeeebeeeeeeebebbbbbbeeeebbeebbebbeebeeeebbebbeeeebeeeeeeebeeb: Contact : bbb bb b queryA 336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411 : * * * * ** * **** ** * * * ** * *** : 7w0e_C_1 106:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 196 SecStr :--HHH SEEEE HHHHHHHHHT-TSS GGGEEEEEEESGGG STTSHHHHHHHHHHHS SS------S EEEEE SSS SS TTTHHHHHHHHHHHT: ExpBur :--beebbbbbbbbebbbebbbb-ebbebebbbbbbbbbbbbbeeeeebbbbbbbbeeeeee------eebebbbbbebbbeeeebeebeebbeebbbbbe: Contact : b queryA 412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500 : * * * * * * * *** * * * * * ** * * * * *: 7w0e_C_1 197:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 287 SecStr : EEE S TTTTHHHHGG-----G EEEEEEE ---- HHHHHHHHHHHHHHHHHHT B TTS SB HHHHHHHHHHHHHHHH: ExpBur :bbbeebeeeeebeeebee-----beebeeeebbbeee----eeeeebbeebeeebeebbeebeeeeeeeeeeeeeeebeeeeebeebeebbebbebbeeb: Contact : bbbbb b b queryA 501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594 : * * * * * * ** * * * * * *** : 7w0e_C_1 288:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 370 SecStr :HHHHBHHHHHHHHHHH---HHHHHHHHHT SHHHHHH---------HHHHHHHHHHHHHH-HHHHHHHS S HHHHHHHHHHHHB HHHHHH----: ExpBur :beebbbbbbbbbbebb---bbbbebebeebbeeebeeb---------beebbebbeebeee-beeebeebeeeeeeeeebeeebbeebbeebbeeb----: queryA 595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687 : * * ** * * ** * * * * * * * * ** * ** * : 7w0e_C_1 371:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 451 SecStr :--HHHHHHHHSS GG--G --------------EEEE S HHHHHHHHHHHHHHHHT HHHHTT EEEE SSS S SSS S S HHHHHH-: ExpBur :--bebbeebbeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbbbeeeebbeebeeeeeeeeeeebbebbe-: Contact : bbb bbbb queryA 688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744 : * * * ** **** ** * * * ** * * * * : 7w0e_C_1 452:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 508 SecStr :TTS EEEE GGGGSS SEEEE S HHHHHHHHTT STT EEEEEEES: ExpBur :eeebbbbbbbeebbbebebeebbbbbbbbebeebbbbbbbbebbbeeebebbbbbbe: Contact : bbb |