Protein Model on 7nga_C_1_B_1
(TEMPLATE: 
7nga
)Protein Model on 7nga_C_1_B_1
(TEMPLATE: 7nga
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | C 1 (A) | polymer(polypeptide(L)) [650 aa] | Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE | |
| 2 | b | B 1 (X) | polymer(polyribonucleotide) | RNA (5'-R(P*AP*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*G)-3') | 298N 299Q(K) 300I(V) 326G 347T 349Q 350I 353N 511Q 514V(I) 518K 546R 635K 636T 637R 662T(I) 663G 664R(A) 668N(S) 675L(Q) 697T 698S(T) 699V 827E 829C(M) 878K(V) 879Y(H) 880K 906S(K) (identity: 58.6 %/36.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7nga_C_1 identity=36.2% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
:* ** * * ** *** *** *** *** * * ** * * *** * ** * * ** * ** * * :
7nga_C_1 310:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 408
SecStr : HHHHHHHGGGGGT EEE TTS HHHHHHHHHHHHHHHHHHTTS EEEE SSHHHHHHHHHHTHHHHHTT-TS B SSS SS HHHHHHH :
ExpBur :eebbeebbebbbeeebbbbbbeeebebeebbbbbbbebbeebeeeeeebbbbbbbeeebbbeebeeebbbebbee-ebebbbbbeeeeeeeebbebbeee:
Contact : bbb b
queryA 342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428
:* ** * *** * ** * ** * * * **** * * ** ** ** *** **** ***** *** ** ** * :
7nga_C_1 409:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 508
SecStr :SEEB HHHHHHHHHHHHSTT TTTSSEEEEE GGG SSS HHHHHHHHHHHHHHHHHHHHHH S EEEEEES S SSHHHHHHHHH:
ExpBur :ebbbbbbeebbebbeeeeeeeeeebebbebbbbbbbbbbebeeebebbebbbbbbebbbebeeeeeeeeeeeeebbbbbbbeebebeebeeeeebbebbb:
Contact : b bb b
queryA 429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528
: ** *** * *** ** * * * * ** * **** **** * * :
7nga_C_1 509:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXXNPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 594
SecStr :HHHHHHT S STTHHHHHHHS ----- HHHHHHHHHHHHHHHHHT S---------- SSSHHHHHHHHHHHHHH----HHHT:
ExpBur :ebbbbbbbeebeebeeeeeebeeebeeeeeeeeee-----eebeeebeebbeebeebbebeeee----------eebeeebbebbeebbeeb----beee:
Contact : b b b
queryA 529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------------------------DEIEQDLTQRFEEKLQELE: 598
: * * ****** ** * ** ** * * * ** * * * :
7nga_C_1 595:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXXXXXXXXXXXXXXXXXXXXXXLDETDEFLMNLFFDNKKMLK: 688
SecStr : TTTSHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHH ------------------------- HHHHHHHHHHHHHHHHHH:
ExpBur :eeeebbb------bbbbeebbbbbebbeebbbebbbebbeebbeeeeebbebeee-------------------------eeebbeebbebbeeeeeebe:
Contact : b
queryA 599:SVSRDPSNENPKLEDLCFILQEEYHLNP-ETITILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILI: 695
: * ** * * * * *** ** ** * * * * * * ** ** * * * **:
7nga_C_1 689:KLAENPKXXXEKLIKLRNTILEQFTRSEXXSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLI: 787
SecStr :HHHH --- HHHHHHHHHHHHHHH -- EE SSHHHHHHHHHHHHH HHHHHHT EE TT HHHHHHHHHHHH-HTSSSEE :
ExpBur :eebeeee---eebeebeebbbebbeebe--eebbbbbeebebbebbbebbeebeebeeeebeeebbbbeeeeeeeebbeeeebeebbeebe-eeebbbbb:
Contact : bbb bbb b b
queryA 696:ATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR: 791
:** ** ** ** ** ** * * ** * * * * * **** * * * *** * ** :
7nga_C_1 788:ATTVAEEGLDIKECNIVIRYGLVTXXXXXXXXXXXARADESTYVLVTXXXXXXXXREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMK: 887
SecStr : SSTTTTTS S SEE BS ----------- BTTB B -------- HHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHHHHHHHHH:
ExpBur :bbebbeebbebeebebbbbbebee-----------bbeeeebbbbbe--------ebeeeeeeeebbeebbeebeeeeeeebeeebeebbeebbeebeee:
Contact : bbb
queryA 792:DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-KPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKI: 889
: * * *** * * * *** * ** * * * * ** * * **:
7nga_C_1 888:VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXXNGEIIC---KCGQAWGTMMVHKGLDLPCLKI: 984
SecStr :HHHHHHHS SS EEESSS B SSSEEEETTTEEEE STTTTTT EEE ----------- EEEE ---TTS EEEEE EETTEE EE G:
ExpBur :eeeeeeeeeeeeeeebebbbbbbeeebbebeebebbeeeebbbbeeebeeebeebeee-----------eeebbb---ebbbbbbebbebeeeebbbbeb:
Contact : b b bbb
queryA 890:ESFVVEDIATGVQTLYSKW: 908
: *** * **:
7nga_C_1 985:RNFVVNFKNNSPKKQYKKW:1003
SecStr :GGEEE TT B SSG:
ExpBur :ebbbbebeeeeebeeeeeb:
Contact : b
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[assembly_id:1]
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