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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [668 aa] | Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [673 aa] | Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN | 287Q 303Y 307K 308S 311S 312K 315E 316R 318G 320R 322T 323G 325S 327A 328T 332V 333P 336Q 337I 340N 878K 880K (identity: 100.0 %/97.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5f9f_C_1 identity=97.9% |
queryA 241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340 :****************************************************************************************************: 5f9f_C_1 11:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 110 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHHHS TT EEEE SSHHHHHHHHHHHHHHHTTTT EEEE GGG TTS HHHHHHT: ExpBur :eeeeebbebbbebbeeeebbbbbbebebeeebbbbbbbbebbeeeeeeeebbbbbbbebeebbeebeeebeeebeeeebebebbbeeebeeeebeeebee: Contact : b b bb bb bb b b bb b bb bb bb b queryA 341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440 :****************************************************************************************************: 5f9f_C_1 111:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 210 SecStr : SEEEE HHHHHHHHHHSSS GGG SEEEEETGGG STT HHHHHHHHHHHHHHSS S EEEEEES TT SSHHHHHHHHHHHHHHTT EEE: ExpBur :bebbbbbbebbbebbeeeebeebeebebbbbbbbbebeeeebbbebbbebbebeeeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbebbbbebb: queryA 441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540 :**************************************************** **************************************: 5f9f_C_1 211:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDXXXXXXXXXXEFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 310 SecStr : TTHHHHTTTS EEEEEE HHHHHHHHHHHHHHHHHHTTS ---------- SSHHHHHHHHHHHHHHTT SSHHHHHHHHHHHHH: ExpBur :ebeeeeeebeeebeebebeeeebeeeeeeebeebbbebbeebbebbeeebee----------ebbeeebeeebeeebeebbeeeeeeeeebbebbbbbbb: queryA 541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640 :****************************************************************************************************: 5f9f_C_1 311:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 410 SecStr :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTS HHHHHHHHHHHTTHHHHHHHTT SS HHHHHHHHHHHHHHHH TT EEEE S HHHH: ExpBur :bbebbeebbbbbebbebbbbebbbeebeebbeebeeeeeeebbeebbeebeeeeeebeebbeeeebebebbebbbebbeebbeeeeebbbbbbbeeeebb: queryA 641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740 :****************************************************************************************************: 5f9f_C_1 411:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 510 SecStr :HHHHHHHHH GGGTT EEE TTSS S HHHHHHHHHH SSSSS SEEEES SSS S S SEEEEES HHHHHHHGGG STT EEEE: ExpBur :ebbeebbeeeeebeebebbbbbeeeeeeeeeebeeeeebeeeebbeeeeeebbbbbbeeebbbeebeebebbbbbbbeeebbebbbebbbbbeeebebbb: queryA 741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840 :****************************************************** ******************************************: 5f9f_C_1 511:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 610 SecStr :EES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHT ---- B S EEEEETTT EEEEGGGEEEETTTEEEE SSSGGG: ExpBur :bbbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeeeeee----eeeeeeebebbbbbbbbebbebeebbbbeeeebbbeeeebee: queryA 841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922 :**********************************************************************************: 5f9f_C_1 611:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 692 SecStr :SEEEEE SS TTEEEEEEEEE GGG EEEEEEEETTEEEEEE GGGEEEEESSS EEE SSGGG B EE TT : ExpBur :ebeeeebeeeeeeeebebebbbbbeeeebebbbbbebebeeeebbbbebebbbbbbeeeeebeeeeebeebebeeeebeeee: Contact : b b |