Protein Model on 4on9_B_1_A_1
(TEMPLATE: 
4on9
)Protein Model on 4on9_B_1_A_1
(TEMPLATE: 4on9
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [495 aa] | Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [514 aa] | Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN | 266T 267G 271T 298N 299Q 300I 301P 302V 304E 305Q 372D 373E 485L 487K 488R 489I 491K 492D 494E 495N 496L 497S 498Q 499I 501N 502R 512W 514V 515T 518K 530E 533R 537A 541Y 581E 582I 719G 720N 747V 750K (identity: 100.0 %/89.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4on9_B_1 identity=89.7% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
:********************************************* ************************************* ***********:
4on9_B_1 29:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPXXXKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGXXXXNVPVEQIVENN: 128
SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHT --- EEEE SSHHHHHHHHHHHHHHHHTTT EEEE ---- HHHHHHH :
ExpBur :eeeebbeebbeebeeebbbbbbbeeebebbebbbbbbeebbeeee---ebbbbbbbeeeebbeebeeebbeebeeeebebebbee----eeebeeebeeb:
Contact : bb b bbbbb bb
queryA 342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
:******************************************************* *******************************************:
4on9_B_1 129:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGXXSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 228
SecStr :SEEEE HHHHHHHHHHTSS GGG SEEEEETGGG TT HHHHHHHHHHHHH -- EEEEEES TT SSHHHHHHHHHHHHHHTT SEEE :
ExpBur :ebbbbbbebbbebbeeeebeebeebebbbbbebeebeeebebbebbbebbebeee--eeeebbbbbbbeebebeebeeeeebbeebbebbbbbbbbbbbe:
Contact : bb
queryA 442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
:****************************************************************************************************:
4on9_B_1 229:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 328
SecStr : TTHHHHHHHS EEEEEE SS HHHHHHHHHHHHHHHHHHHT HHHHH SS TTSHHHHHHHHHHHHHHHH S HHHHHHHHHHHHHH:
ExpBur :beeeeeebeeebeeeeeeeeebeebeebebeebbbebbeebbeebeeebeebeeeeeeeeeebeeeebeebbeebbeebeebeeeeeeebeebbebbebb:
Contact : b bbb bb bbbbbb bb b bb b b b b b
queryA 542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
:****************************************************************************************************:
4on9_B_1 329:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 428
SecStr :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHH GGG HHHHHHHHHHHHHHHH TT EEEE S HHHHH:
ExpBur :bebbeebbbbbbbbebbbbebbbeebeebbeebeeeeeeeebeebbeebeeebeebeebeeeeebebebbeebbebbeebbeeeeebebebebeeeebbe:
Contact : bb
queryA 642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
:******************* ********** **************** *******:
4on9_B_1 429:ALKNWIEGNPKLSFLKPGIXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDHNILIATXXXXXXXXIAQCNLVILYEYVGNVXXXXXXXXXXXXXGSKCFLL: 528
SecStr :HHHHHHHH GGGTT EE --------------------------- SEEEE -------- SSSEEEEES ------------- EEEEE:
ExpBur :bbeebbeebeebeebebbe---------------------------eeeebbebee--------eeebebebbbbbeeee-------------ebbbbeb:
Contact : bb
queryA 742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDS: 793
:****************************************************:
4on9_B_1 529:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDS: 580
SecStr :ES HHHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHH :
ExpBur :beeeeebeeeeeeeeeeebbeebbeebeeeeeeebeeebeebbeeebeeeee:
Contact : b b
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[assembly_id:3]
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