[pdbjlvh2]Protein Model on 8scz_A

Protein Model on 8scz_A_1 (TEMPLATE: 8scz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [635 aa]	Antiviral innate immune response receptor RIG-I :RIGI_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8scz_A_1 identity=93.1%

queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :****************************************************************************************************:
8scz_A_1     204:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 303
SecStr          :   HHHHHHHSHHHHT  B  B SSSHHHHHHHHHHHHHHHHT  TT     EEE SSHHHHHHHHHHHHHHTTSS   EE   TTTTTTS HHHHHHT :    
ExpBur          :eeeebbeebbebbeeebbbbbbbeeeebbbebbbbbbbebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeeeeeeebeebbeeb:    

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :****************************************************************************************************:
8scz_A_1     304:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 403
SecStr          :SEE   HHHHHHHHHHTSS  GGG SEEEETTGGGTTSS HHHHHHHHHHHHHTTT   S  EEEE BS     S  SHHHHHHHHHHHHHHTT SB   :    
ExpBur          :bbbbbbbebbbebeeeeebebbeebbbbbbbebeebeeebebbebbbebbebeeeeeeeeebbbbbbbeebbbeebeeeeebbeebbebbbbbbbbbbbe:    

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :****************************************************************************************************:
8scz_A_1     404:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 503
SecStr          : SS  TTGGGT     EEEEE    S  HHHHHHHHHHHHHHHHHTTT S HHHH       TTSHHHHHHHHHHHHHHTT   TTSSHHHHHHHHHHHH:    
ExpBur          :beebeeebeeebeeeeeeeeeeeebeeeebeebbbebbeebbebbeeebeebeeebeeeebebbeeebbebbeebbeebbeeeeeeeeebbebbbbbbbb:    

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
                :****************************************************************************************************:
8scz_A_1     504:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 603
SecStr          :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHTT  SHHHHHHHHHHHHHHHHHHHHHT TTS  HHHHHHHHHHHHHHHH TT  EEEE S HHHHH:    
ExpBur          :bbbbeebbbbbbbbebbbbebbbeebeebbeebeeebeeebbeebbebbeebbeebeebbeeeebebebbebbbebbeebbeeeeebebbbbbeeeebbe:    

queryA       642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
                :********************                            **********       ************            ***********:
8scz_A_1     604:ALKNWIEGNPKLSFLKPGILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXXXXXXXXXXXGRARGSKCFLL: 703
SecStr          :HHHHHHTT SS  S    B ----------------------------  SEEEES  -------    EEEEES  ------------  SSS EEEEE:    
ExpBur          :bbbebbeebeebeebeebee----------------------------eebbebbeee-------eeeebebbbbee------------eeeeebebbbb:    

queryA       742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841
                :****************************************************************************************************:
8scz_A_1     704:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 803
SecStr          :ESSHHHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHT         S  EEE SSS  EEEEGGGEEESSSS EEE  STTTTS:    
ExpBur          :beeebbbeebeeeeebeebbeebbeebeeeeeeebeeebeebbeebbeebeeeeeeeeeeeeeebbbbbbbbbbebbebeebbbbeeeebbbbeeebeeb:    

queryA       842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
                :**********************************************************************************:
8scz_A_1     804:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 885
SecStr          :EEEEE SS    TT EEEEEEEE SSS   B EEEEESSS    EE GGG EEE SSS  EEE SSTTT  S  EE  TTT :    
ExpBur          :beeeebeeeeeeeebeeebebbbeeebbebebbbbbeeeeeebbbbebebbbbbbeeeeebeeeeebeebebeeeebeeeee:

Protein Model on 8scz_A_1 (TEMPLATE: 8scz )

Input Residue Numbers for Focused Sites