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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1582 aa] | Endoribonuclease Dcr-1 :DCR1_DROME |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8dgi_A_1 identity=23.7% |
queryA 241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339 :* ** * ** * ***** * * * * * * * ** * : 8dgi_A_1 15:FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCEVGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWT: 109 SecStr : TTTHHHHHHHH-S EEEE S HHHHHHHHHHHHHHHHHH--HHHTT BEEEE SSTTS SS HHHHHHHHTS S E--EE TT SSTTT: ExpBur :eebebebbbbbbbbbe-eebbbbbeebebbbbbbbbbbbbbbbe--bbeeeebbbbbbeebeeeeeebbbbbbbbbbbbbbb--ebbeeeeeeeeeebbe: queryA 340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439 : ** * * ** * ** * * * ** * * * * ** : 8dgi_A_1 110:DYHVSILRPEGFLYLLETREL-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHSAGCELQQLSAMLATLEQSVL: 200 SecStr :S SEEEE HHHHHHHHHTTSS- GGGB EEEETTTTSHHH---HHHHHHHHHHHTTTS GGG EEEEE-----E GGG S HHHHHHHHHHHHHHH : ExpBur :eebbbbbbbeebeebbeeeeb-ebeebbbbbbbebbeeeb---beebeebbeebbeebeeeeebbbbbb-----bbbbbbbebebbbbebbbebbeebbe: queryA 440:ATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKA: 537 : * * * * * : 8dgi_A_1 201:CQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKSF----------------------------------------------------: 248 SecStr : EEE SHHHHHHHSS EEEEEE HHHHHHHHHHHHHHHH----------------------------------------------------: ExpBur :bbbbbbbebbbbbbbbeebebebbbbeebeeeebbeebeeebeebbee----------------------------------------------------: queryA 538:LFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVK--: 635 : : 8dgi_A_1 249:--------------------------------------------------------------------------------------------------LL: 250 SecStr :--------------------------------------------------------------------------------------------------HH: ExpBur :--------------------------------------------------------------------------------------------------be: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 8dgi_A_1 251:DHRYDPYEIYGTDQFMDELKDIPDPKVDPLNVINSLLVVLHEMGPWCTQRAAHHFYQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLGSG: 350 SecStr :HS HHHHT TT TTHHHHS TTHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHS TT: ExpBur :ebeeebeeeeeeeeeeeebeebeebbeebeebbebbeebbeebbbbbbbbbbeebeeebeeebeebeeeebeebbbebbebbeebeeebeebbeeeeeee: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 8dgi_A_1 351:SDSRQTIERYSSPKVRRLLQTLRCFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 450 SecStr : HHHHHHHHS HHHHHHHHHHHTT --------------------------------------------------------------------------: ExpBur :eebbebbeebbbbbbebbbebbeebe--------------------------------------------------------------------------: queryA 636:------------------------------------------------------TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPA: 677 : * * * * * ** * * : 8dgi_A_1 451:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRR: 550 SecStr :----------------------------------------- EEEE S HHHHHHHHHHHHHHHTT STTTT EEE TTT HHHHHHHHHH: ExpBur :-----------------------------------------ebbbbbbbeeebbbbbbeebbbbbbeebeebeebebbebeeeebeeeeeeeebeeeeee: queryA 678:QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS: 743 :* * * * * ** *** **** **** * ** ** * : 8dgi_A_1 551:QEEVLKRFRMH-DCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA: 615 SecStr :HHHHHHHHHTT-SSSEEE GGGTTTS SEEEESS SSHHHHHHHHHH SSS EEEEEE : ExpBur :beebbeebeee-ebbbbbbbbbbbbeeebeebbbbbbbeebebbbbbbbbbbbbbeeebebbbbbe: |