[pdbjlvh2]Protein Model on 8dg7_A

Protein Model on 8dg7_A_1 (TEMPLATE: 8dg7 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1635 aa]	Endoribonuclease Dcr-1 :DCR1_DROME

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8dg7_A_1 identity=23.7%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :* **  * **   *    *****      * *  *               * * *             *           **           *      :
8dg7_A_1      15:FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCEVGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWT: 109
SecStr          :     HHHHHHHHHHH-S  B     HHHHHHHHHHHHHHHHHH--HTTTT EEE B SS SSSSS  HHHHHHHHSSS   --    TT    SS  GG:    
ExpBur          :bbebebbbbbbbbbbe-ebbbbbbbebebbbbbbbbbbbbbbbe--bbeeeebbbbbbeebbeeeeebbbebbbebbbbbeb--bbbeeeeeeeeeeebe:    

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :     ** *      *       **   *     **       *  *                *   **      *        *       * *  ** :
8dg7_A_1     110:DYHVSILRPEGFLYLLETREL-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHSAGCELQQLSAMLATLEQSVL: 200
SecStr          :G SB  B HHHHHHHHHTTSS- TTTEEEE B   SSHHH---HHHHHHHHHSSSSSS TTT  B  B -----   TTSSSS STTHHHHHHHHHHHHT:    
ExpBur          :ebebbbbebebbbebbeeeeb-eeeebbbbbbbbbbeeeb---beebeebbeebeeebeeeebbebbbb-----bbbbbbbbeebeebeebbeebbebbe:    

queryA       440:ATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKA: 537
                :              *   *            *      *       *                                                     :
8dg7_A_1     201:CQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKSF----------------------------------------------------: 248
SecStr          :  B   STTTTTTSSS   EEEEEE       HHHHHHHHHHHHHHHH----------------------------------------------------:    
ExpBur          :bebbbbbebbbbbbbeeebebbbbbbeebeeeebbebbbbebbbebbe----------------------------------------------------:    

queryA       538:LFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVK--: 635
                :                                                                                                    :
8dg7_A_1     249:--------------------------------------------------------------------------------------------------LL: 250
SecStr          :--------------------------------------------------------------------------------------------------HH:    
ExpBur          :--------------------------------------------------------------------------------------------------be:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
8dg7_A_1     251:DHRYDPXXXXXXXXXXXXXXXXXXXXXDPLNVINSLLVVLHEMGPWCTQRAAHHFYQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLXXX: 350
SecStr          :T     --------------------- HHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHSTT   HHHHHHHHHHHHHHHHHHHHHHHHHHH  ---:    
ExpBur          :eeeeee---------------------ebeebbebbbebbebbbbbbbbbbbeebeeebeeebeebeeeeeeebbeebbebbeebeeebeebbeeee---:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
8dg7_A_1     351:XXSRQTIERYSSPKVRRLLQTLRCFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 450
SecStr          :-- HHHHHHSS HHHHHHHHHHHH  --------------------------------------------------------------------------:    
ExpBur          :--ebebbeebbbbbbebbbebbeebe--------------------------------------------------------------------------:    

queryA       636:------------------------------------------------------TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPA: 677
                :                                                       * *   *       * * **     * *                 :
8dg7_A_1     451:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRR: 550
SecStr          :-----------------------------------------   B    SSHHHHHHHHHHHHHHHHH STTTT  EEE       SSS HHHHHHHHHH:    
ExpBur          :-----------------------------------------ebbbbbbbeeebbbebbeebbbebbeebeebeebebbebbeeeeeeeeeeeebeebeee:    

queryA       678:QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS: 743
                :*   *  *    * * ** ***  ****   ****             *  ** **       *  :
8dg7_A_1     551:QEEVLKRFRMH-DCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA: 615
SecStr          :HHHHHHHHHSS-S  EEE  GGGTTT      SEEEE S  SSSHHHHTTSTT  SSS EEEEEE :    
ExpBur          :bbebbeebbee-ebbbbbbbeebbbebeeeebbbbbbbbbbebbbbbbbbbbbbeeeebebbbbbb:

Protein Model on 8dg7_A_1 (TEMPLATE: 8dg7 )

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