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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1635 aa] | Endoribonuclease Dcr-1 :DCR1_DROME |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8dg5_A_1 identity=23.7% |
queryA 241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339 :* ** * ** * ***** * * * * * * * ** * : 8dg5_A_1 15:FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCEVGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWT: 109 SecStr : HHHHHHHHHHH-S HHHHHHHHHHHHHHHHHH--HTTTT EEE SS SS SS HHHHHHHHSSS -- TT SS ST: ExpBur :bbebbbbbbbbbbbee-ebbbbbbbbbebbbbbbbbbbbbbbbe--bbeeeebbbbbbeebeeeeeebbbebbbeebbbbeb--bbbeeebeeeeeeebe: queryA 340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439 : ** * * ** * ** * * * ** * * * * ** : 8dg5_A_1 110:DYHVSILRPEGFLYLLETREL-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHSAGCELQQLSAMLATLEQSVL: 200 SecStr :T SB HHHHHHHHHTTSS- SSSEEEE B SSHHH---HHHHHHHHSSSSSSS TTT B B ----- SSSSSS STTHHHHHHHHHHHTT: ExpBur :ebebbbbebebbbebbeeeeb-eeeebbbbbbbbbbbeeb---beebeebbeebeeebeeeebbebbbb-----bbbbbbbbbebeebeebbeebbeebe: queryA 440:ATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKA: 537 : * * * * * : 8dg5_A_1 201:CQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKSF----------------------------------------------------: 248 SecStr : STTTTTTSSS EEEEEE HHHHHHHHHHHHHHHH----------------------------------------------------: ExpBur :bebbbbbebbbbbbbeeebebbbbbbeebeebebbebbbbbbbbebbe----------------------------------------------------: queryA 538:LFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVK--: 635 : : 8dg5_A_1 249:--------------------------------------------------------------------------------------------------LL: 250 SecStr :--------------------------------------------------------------------------------------------------HH: ExpBur :--------------------------------------------------------------------------------------------------be: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 8dg5_A_1 251:DHRYDPXXXXXXXXXXXXXXXXXXXXXDPLNVINSLLVVLHEMGPWCTQRAAHHFYQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLXXX: 350 SecStr :T --------------------- TTHHHHTTHHHHHHT HHHHHHHHHHHHHHHHTTTTT SSSHHHHHHHHHHHHHHHHHHHHHHHHHH ---: ExpBur :eeeeee---------------------ebeebbebbbebbbbbbbbbbbbbbeebeeebeeebeebeeeeeeebbeebbebbeebeebbeebbeeee---: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 8dg5_A_1 351:XXSRQTIERYSSPKVRRLLQTLRCFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 450 SecStr :-- HHHHHHSS HHHHHHHHHHHS --------------------------------------------------------------------------: ExpBur :--eeebbeeebbbbbebbbebbeebe--------------------------------------------------------------------------: queryA 636:------------------------------------------------------TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPA: 677 : * * * * * ** * * : 8dg5_A_1 451:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRR: 550 SecStr :----------------------------------------- B SSSSHHHHHHHHHHHHHHHSGGGTT B BTTB HHHHHHHHHH: ExpBur :-----------------------------------------ebbbbbbbeeebbbebbeebbbebbeebeebeebebbbbbeeeeeeeeeeeeeeeeeee: queryA 678:QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS: 743 :* * * * * ** *** **** **** * ** ** * : 8dg5_A_1 551:QEEVLKRFRMH-DCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA: 615 SecStr :HHHHHHHHHTT-S B GGGTTT SEEEESS SSHHHHHHHHTT SSS EEEEEE : ExpBur :bbebbeebbee-ebbbbbbbebbbbebebeebbbbbbbbbbebbbbbbbbbbbbeeeebebbbbbb: |