[pdbjlvh2]Protein Model on 7yz4_A

Protein Model on 7yz4_A_1 (TEMPLATE: 7yz4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1234 aa]	Endoribonuclease Dicer :DICER_MOUSE

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7yz4_A_1 identity=32.3%

queryA       246:YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENN: 341
                :** ** * *    *** *  ** ****   *      *             **  *      ** *                   *        *     :
7yz4_A_1     100:YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKH: 198
SecStr          :HHHHH-HHHHHHS EEEE SSHHHHHHHHHHHHHHTHHHH  SSGGG  EEEEEESSSSTTTHHHHHHHHH S  EEEE  HHHHHT  HHHHHHHHHT :    
ExpBur          :ebeeb-bebbbeebbbbbbeeeebbbbbbbbbbbbbbeebeeeeeeebebbbbbbeeeeebeebbebbebbbebebbebeeeeebeebeeeebeebbeeb:    

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :   * *       ** *   ***   *  *****     ***  **      **  *    *   *****   *                          :
7yz4_A_1     199:QVLIMTCYVALTVLKNGYL-SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG--------------------------: 265
SecStr          :SEEEEEHHHHHHHHHHTSS- TTTEEEEEETTGGGGGTT HHHHHH------HHHHTSSS      EESSSS  --------------------------:    
ExpBur          :ebbbbbbebbeebbeeeeb-ebeebbbbbbbbbbbbeeebbbeebb------eebeeeeebbebbbbbeebbee--------------------------:    

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :                                                                                                    :
7yz4_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-----------: 630
                :                                                                                                    :
7yz4_A_1     266:-----------------------------------------------------------------------------------------KCDPEELEEKI: 276
SecStr          :-----------------------------------------------------------------------------------------SSHHHHHHHHH:    
ExpBur          :-----------------------------------------------------------------------------------------eebbeebeeeb:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
7yz4_A_1     277:QKLERILRSDAETAXXXXXXXXXXXXPCEIVVDCGPFTDRSGLYERLLMELEAALDFXXXXXXXXXXXXXXXXXXSKQILSDCRAVLVVLGPWCADKVAG: 376
SecStr          :HHHHHHHTSEE   ------------  EEEEEE     SS HHHHHHHHHHHHHH ------------------ HHHHHHHHHHHHHS HHHHHHHHH:    
ExpBur          :eebbebbebebbbe------------eeeeebebeeeebeebbeeebeebbeebeee------------------eeebbebbbebbebbbbbbbbebbe:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
7yz4_A_1     377:MMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYVTPKVMKLLEILRKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 476
SecStr          :HHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHGGGGS  SSS  SSSS HHHHHHHHHHHH ------------------------------------:    
ExpBur          :ebbeebeeebeeeeeeeeeeebeebbebbeebeeeeeebeeeeeeeeeebbbebebbbebbeee------------------------------------:    

queryA       631:----------------------ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCILDAFKASGDHNILIATSV: 699
                :                      * **  *     *   *       * *        *                    *   *  * *    * ******:
7yz4_A_1     477:XXXXXXXXXXXXXXXXXXXXX-IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEVLRKFRAH-ETNLLIATSV: 574
SecStr          :---------------------- EEESSHHHHHHHHHHHHHHHHH TT TT  EEE  ---------------- HHHHHHHHHHHHTT-TSSEEEEEGG:    
ExpBur          :----------------------bbbbeeeebbebbbebbebbbeebeebeeeebbebe----------------eeeeeeeeeeeeeee-eeebbbbbee:    

queryA       700:ADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIE-KEQINMYK--EKMMND: 763
                :  ** **  ****             *  ** **  *    *          *    **  **    :
7yz4_A_1     575:VEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRN: 641
SecStr          :GGSS      SEE  SS  SSHHHHHHHHHT   TT EEEEEEETTTHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbeebebeebebbbbbebbeebebbeebbebbebeebebbbbbeeeebeebeeebeebeebeeebee:

Protein Model on 7yz4_A_1 (TEMPLATE: 7yz4 )

Input Residue Numbers for Focused Sites