[pdbjlvh2]Protein Model on 7xw3_A

Protein Model on 7xw3_A_1 (TEMPLATE: 7xw3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1502 aa]	Endoribonuclease Dicer :DICER_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7xw3_A_1 identity=32.8%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQ: 336
                :  ** ** ** * *    *** *  ** ****   *                    **  *      ** *                   *        *:
7xw3_A_1      42:YTPRKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQ: 140
SecStr          :    SGGGTT-HHHHHHS EE   SSS SSHHHHHHHHGGGGGGTSS TTTT  B EEE SSHHHHHHHHHHHHTT  S B     SSGGGG  HHHHHH:    
ExpBur          :eebeebbeee-bebbeeeebbbbbeeebbbbbbbbbbbbbbbeebbeebeeebebbbbbbeeeebbebbbebbeebbbbebbebeeeeebeeeeeeebee:    

queryA       337:IVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GVGDAKNTDEALDYICKLCASL: 434
                :        * *     * ** *   ***   *  *****     ***  **      **       *   *****   *  *     *      *   * :
7xw3_A_1     141:EFTKHQVLIMTCYVALNVLKNGYL-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKS-: 232
SecStr          :HHHH SBEEE HHHHHHHHHTTSS- TTSBS EEESSGGGGGSS HHHHHH------HHHHHSS    EEE  SSTT S   HHHHHHHHHHHHHHHTS-:    
ExpBur          :bbeebbbbbbbbebbbebbeeeeb-ebebbbbbbbbebeebeeebbbeebb------eebeeeeeebebbbbbeebbeeeeeeeebeebbeebeeebeb-:    

queryA       435:DASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRI: 534
                :                                                                                                    :
7xw3_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       535:CKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT----: 630
                :                                                                                                    :
7xw3_A_1     233:------------------------------------------------------------------------------------------------NAET: 236
SecStr          :------------------------------------------------------------------------------------------------ B  :    
ExpBur          :------------------------------------------------------------------------------------------------ebbb:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
7xw3_A_1     237:ATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHE: 336
SecStr          :  SS    SSSEEEEEEEEE       SS HHHHHHHHHHHHHHHTT    S  TTS SHHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHH :    
ExpBur          :bbbbebbbeebeebeeebbeebeeeeebebbeebeeebeebeeebeebebeeeeebebbbebbeebbebbeebbeebbbbbbbbbbbebbeebeebbeee:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
7xw3_A_1     337:QEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETNFPS: 436
SecStr          :  HHHHHHHHHHHHHHHHHHHHHHHHS SSS  TTSS HHHHHHHHHHTTS   SSS    ---------------------------------  S S :    
ExpBur          :eeeebeebbeebbebbeebeeebeeeeeeeebebeebbebbbebbebbbeebbeeeeeeee---------------------------------eebeeb:    

queryA       631:---------ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCILDAFKASGDHNILIATSVADEGIDIAQCNLV: 712
                :         * **  *     *   *       * *        ** *   **       *    *   *  * *    * *****   ** **  ****:
7xw3_A_1     437:PFTNILCG-IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAH-ETNLLIATSIVEEGVDIPKCNLV: 534
SecStr          :TTTSS  E-EEEES STTHHHHHHHHHHHHTS HHHHS   EE     S  SSTT THHHHHHHHHHHHHHHHHTT-S SEEEEETT SSS      SEE:    
ExpBur          :ebbbbbbb-bbbbebbbbbbbbbebbeebbeeeeebeebebeebeeeeebebeeeeeeebebeeeeebbeebbeeb-ebbbbbbbeeebeeeebeebbbb:    

queryA       713:ILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIE-KEQINMYK--EKMMND: 763
                :             *  ** **  *    *          *    **  **    :
7xw3_A_1     535:VRFDLPTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRN: 588
SecStr          :EESS   SHHHHHHHHHT  SSEEEEEEEE TTHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbbeebeebebbbebbbbbebeebebbbbbbeebeeebeebeeebeebbeebbe:

Protein Model on 7xw3_A_1 (TEMPLATE: 7xw3 )

Input Residue Numbers for Focused Sites