[pdbjlvh2]Protein Model on 7to0_A

Protein Model on 7to0_A_1 (TEMPLATE: 7to0 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [682 aa]	Antiviral innate immune response receptor RIG-I :DDX58_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7to0_A_1 identity=100.0%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
7to0_A_1     241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
SecStr          :    HHHHHHHTTTTTS  B  B SSHHHHHHHHHHHHHHHTTSS TT     EEE SSHHHHHHHHHHHHHHHTTTT  EE   TTT SS  HHHHHHT:    
ExpBur          :eeeeebbebbbeebeeeebbbbbbebeebbbbbbbbbbbebbeeeeeeeebbbbbbbeeebbbeebeeebbeebeeeeeebebbbeeeeeeeebeebbee:    

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
7to0_A_1     341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
SecStr          : SEE   HHHHHHHHHHTS S TTS S EEESSGGG  SS HHHHHHHHHHHHHHTT   S   B   BS    TT  SHHHHHHHHHHHHHHTT SB  :    
ExpBur          :bbbbbbbbebbbebeeeebbeebeebebbbbbbbbebeeeebbbebbbebbebeeeeeeeeebbbbbbbebbbbeebeeeeebbeebbebbbbbbbbbbb:    

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :****************************************************************************************************:
7to0_A_1     441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
SecStr          :   TTHHHHTTTS   EEEE      S  HHHHHHHHHHHHHHHHHHTT SS GGGS  SS  TTSHHHHHHHHHHHHHHTT   TTSSSHHHHHHHHHH:    
ExpBur          :ebeebeeebeeebeebebeeeebeebeeeebeebbbebbeebbebbeeebeebeeebeeeebebbeeebeebbeebbeebbeeeeeeeeebbebbbbbbb:    

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
7to0_A_1     541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
SecStr          :HHHHHHHHHHHHHHHHHS SHHHHHHHHHHHHHHHSS   HHHHHHHHHHHHHHHHHHHHHT TTS  HHHHHHHHHHHHHHHH SS  B  B S HHHH:    
ExpBur          :bbebbeebbbbbebbebbbbebbbeebeebbeeeeeeeebeebeebbeebeeeeeebbebbeeeebebebbebbbebbeebbeeeeebbbbbbbeeeebb:    

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :****************************************************************************************************:
7to0_A_1     641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
SecStr          :HHHHHHHHS SS  S  B        SSSS S  HHHHHHHHHT SSSSS SB  B GGGTSS      SEEEEES    HHHHHHHHTT  SSS EEEE:    
ExpBur          :ebbeebbeebeebeebeebbbbbeeeeeeeeebeeeebeebbeebeeeeebbbbbbbebbbeebebeebebbbbbbbeeebbebbbbbebbebeebebbb:    

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :****************************************************************************************************:
7to0_A_1     741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
SecStr          :E S HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH             EEEESSS  EEEESSS EESSSS EE  STTTTT:    
ExpBur          :bbeeeebbeebeebeebbebbeebbeebeeeeeeebeeebeeebeeeeeeeeeeeeeeeeeeeeebebbbbbbbbebbebeebbbbeeeebbbeeeebee:    

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :**********************************************************************************:
7to0_A_1     841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
SecStr          :SEEEEE SS   SSS  EEEEEEE SSS   B EEEEESSSSEEEEE GGGEEEE SSS  B   SSSSS  S  EE  S  :    
ExpBur          :bbeeeebeeeeeeeebebebbbbbeeebbebebbbbbebeeeebbbbebebbbbbbeeeeebeeeeebeebebeeeebeeee:

Protein Model on 7to0_A_1 (TEMPLATE: 7to0 )

Input Residue Numbers for Focused Sites