Protein Model on 7jl1_A_1 focusing on 239-th site
(TEMPLATE: 
7jl1
)Protein Model on 7jl1_A_1 focusing on 239-th site
(TEMPLATE: 7jl1
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(7jl1_A auth_asym_id:A) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 239 | S | 36 | 239 | S | e | 71.9 | |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [656 aa] | Antiviral innate immune response receptor RIG-I :DDX58_HUMAN | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7jl1_A_1 identity=96.5% |
queryA 239:SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIV: 338
:****************************************************************************************************:
7jl1_A_1 36:SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIV: 135
SecStr : HHHHHTTHHHHTT EEEE TTS HHHHHHHHHHHHHHHS TT EEEE SSHHHHHHHHHHHHHHHHTT EEEE SS SS HHHHH:
ExpBur :eeeeeeebbebbbeebeeeebbbbbbebebbbebbbbbbbeebbeeeeeeeebbbbbbbebbbbbebbeeebeeebeeeeeeebbbbeeeeeeeebeebb:
queryA 339:ENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 438
:*********************************************************** ***************************************:
7jl1_A_1 136:ENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 235
SecStr :HH SEEEE HHHHHHHHHHTSS GGG S EEES GGG STT HHHHHHHHHHHHHH -- EEEEES TT SSHHHHHHHHHHHHHHTT E:
ExpBur :eebbbbbbbbeebbebbeeeebeebeebebbbbbbbbbbeeeeebbebbbebbeeeeee--eeebbbbbbbbbbbbeebeeeeebbeebbebbbbbbbee:
queryA 439:IATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL: 538
:**************************************************************************************** ***********:
7jl1_A_1 236:IATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL: 335
SecStr :EEE TTHHHHHHHS EEEEEE S HHHHHHHHHHHHHHHHHHHHSS SSTT S TTSHHHHHHHHHHHHHHTT - HHHHHHHHH:
ExpBur :bbbbeeeeeebeeebeebebeeeebeeeeebebeebbbebbeebbeebeeebeebeeebeeeeeeeeeeebeebbeebbeebbeeeee-eeebbebbbbb:
queryA 539:FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRA: 638
:************************************ **********************************************************:
7jl1_A_1 336:FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRA: 435
SecStr :HHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHH ------ HHHHHHHHHHTTHHHHHHHHT GGG HHHHHHHHHHHHHHHH SS EEEE SSHH:
ExpBur :bbbbbbbeebbbbbeebeebbbebbbeebeebbeee------ebeeebeeebeeebeebbebbeeeebebbbbebbbebbeebbeeeeebbbbbbbeeee:
queryA 639:LVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKC: 738
:************************************************ **************************************************:
7jl1_A_1 436:LVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKC: 535
SecStr :HHHHHHHHHHT SS S EEEE S EETTEE HHHHHHHHHHH -- EEEE GGG S SS EEEEES SHHHHHHHHT STT EE:
ExpBur :bbebbeebbeebeebeebebbebbeeeeeeeeeebebeebbebbeebe--eeeebbbbbebbbbbbebeebbbbbbbbbeeebbebbbbbbbbebeebeb:
queryA 739:FLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF: 838
:********************************************************** ***********************************:
7jl1_A_1 536:FLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF: 635
SecStr :EEEES HHHHHHHHHHHHHHHHHHHHHHHGGGS TTHHHHHHHHHHHHHHHHHHHT ------- EEEETTT EEEEGGGB BTTTB BB SHHH:
ExpBur :bbbbeeeebbeebeebeeebebbeebbeebeeeeeeebeeebeebbeeeeeeeeeeee-------ebeebbbbbbbbebbebeebebbeeeebbbeeeeb:
queryA 839:KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPF: 918
:************* *************************************************************:
7jl1_A_1 636:KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPF: 715
SecStr :HHSB SS S ------ B BSSSS EEEEEETTEEEEEE GGGEEEE SSS EE SSTTT :
ExpBur :eebbeeeeebeee------eeeebbbeeeebeeebbeeeeeeeeebbbbebebbbbbbeeeeebebeeebeebebeeeee:
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[assembly_id:1]
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