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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1137 aa] | Endoribonuclease Dicer homolog 1 :DCL1_ARATH |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ele_A_1 identity=32.3% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH-HLKKFPQGQKGKVVFFANQIP-VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341 :* *** * * **** ** *** * * * * ** * ** * * * : 7ele_A_1 250:RRYQLDV-LEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESK: 348 SecStr : HHHHHH-HHHHHHS EEE SSTTTHHHHHHHHHHHHHHS SSTTS EEE S HHHHHHHHHHHHHS SS B SS SSHHHHHHHHHHHH : ExpBur :eebbeee-eeebeeebbbbbbbebeebeebebebbeebbeeeeeeebbbbbbebbeeeebbebbeeebeeebeeebbbbebeeebeeebbebbeebeeeb: queryA 342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS-VGV-GDAKNTDEALDYICKLCASLDASVI: 439 : * *** * * * * * **** * *** * * * *** * * * * * * ** * : 7ele_A_1 349:QVLVMTAQILLNILRHSII-RMETIDLLILDECHHAVKKHPYSLVMSEFYHTT---PKDKRPAIFGMTASPVNLKGVSSQVDCAIK-IRNLETKLD-STV: 442 SecStr :SB HHHHHHHHGGG T-TGGG EEEE GGG SSSSHHHHHHHHTSS ---TT SS EEE SS S TTTTSSS SH-HHHHHHHS - EE: ExpBur :bbbbbbbeeeeebbbeeee-ebbbebbebbbbbbebeeeeebbeebebbeebe---eeebbeebbbbbbebbeeeeeeebeebbbe-bbbbbeebe-beb: queryA 440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539 : * * *** * * : 7ele_A_1 443:CTIK-DRKELEKHVPMPSEI--------------------------------------------------------------------------------: 461 SecStr :E - SSSSSSS EEE--------------------------------------------------------------------------------: ExpBur :bbbe-eeebbeeebeebeee--------------------------------------------------------------------------------: queryA 540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETI----------: 629 : : 7ele_A_1 462:------------------------------------------------------------------------------------------VVEYDKAATM: 471 SecStr :------------------------------------------------------------------------------------------EE S SS : ExpBur :------------------------------------------------------------------------------------------eeeebebeee: queryA -1:----------------------------------------------------------------------------------------------------: -1 : : 7ele_A_1 472:WSLHETIKQMIAAVEEAAQASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAANLIHKLRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVD: 571 SecStr : HHHHHHHHHHHHHHHHHHH -------------------------------- HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HH: ExpBur :eeebeeebeebbeebeebeeee--------------------------------eeeebbeebebbbebbeebbbbbbebbbebbeeebeeeeeebeeee: queryA 630:------------------------------------------------------------------------------------------------TILF: 633 : * *: 7ele_A_1 572:VKFQESYLSEVVSLLQCELLEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIKLLLKYQHTADFR-AIVF: 670 SecStr :HHHHHHHHHHHHHHHHHHHHH -------------------------------------------------------- HHHHHHTTTTT SS-EEE : ExpBur :eeebbeebeebbeebbeebeebe--------------------------------------------------------bbeebeeeeeeeebeb-bbbb: queryA 634:VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRA: 733 :* * * *** * * * * * * ***** ** ** *** * * ** *** * : 7ele_A_1 671:VERVVAALVLPKVFAELPSLSFIRCASMIGH---NNSQEMKSSQMQDTISKFR-DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARK: 766 SecStr : S HHHHHHHHHHHHHSS S S---SS SS HHHHHHHHHHHH-SHHHHHH EE SS S SEEE TT TTHHHHHHHHHTS : ExpBur :eeeeebbebeeebeeeeeeeebbbbbbeeee---eeeebbeeeebbebbeebe-eeebbebbbbeeeeeeeebeebebbbbbebeeeeebbbbbbbbbee: queryA 734:RGSKCFLLTSNAGV: 747 : ** * *: 7ele_A_1 767:PGSDYILMVERGNV: 780 SecStr :SS EEEEE SSST: ExpBur :eebebbbbbbebee: |