[pdbjlvh2]Protein Model on 7eld_A

Protein Model on 7eld_A_1 (TEMPLATE: 7eld )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1137 aa]	Endoribonuclease Dicer homolog 1 :DCL1_ARATH

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7eld_A_1 identity=32.3%

queryA       244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH-HLKKFPQGQKGKVVFFANQIP-VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :* ***   *   * ****    ** ***    *     *     *  *   **     * ** *            *                    *  :
7eld_A_1     250:RRYQLDV-LEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESK: 348
SecStr          : HHHHHH-HHHHHHS EE   SS TTHHHHHHHHHHHHHHS  SSGGGS  EEE   HHHHHHHHHHHHHS  S EEE       HHHHHHHHHHHHHH :    
ExpBur          :bebbeeb-beebeeebbbbbbbeeeebeebbbebbebbbeeeeeeebbbbbbbbbeebbebebbbeebeeebeeebbebebeeebeeebeeebeebeeee:    

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS-VGV-GDAKNTDEALDYICKLCASLDASVI: 439
                :     * *** * *    *       * * ****   * ***   *               *   * *** *   *     * *   *  *   ** *  :
7eld_A_1     349:QVLVMTAQILLNILRHSII-RMETIDLLILDECHHAVKKHPYSLVMSEFYHTT---PKDKRPAIFGMTASPVNLKGVSSQVDCAIK-IRNLETKLD-STV: 442
SecStr          :SEEEE HHHHHHHHTT  T-TGGG  S EE  TTT  SSSHHHHHHHHHHS S---SSSS S  EE    SS SS TTT SSS HH-HHHHHHHHT- EE:    
ExpBur          :bbbbbbbebbbebbbeeee-ebbbbbbbbbbbbbebeeeeebbebbbbbeebe---beebbebbbbbbbbbbbbeebeebebbbbe-bbbbbebbe-bee:    

queryA       440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
                : * *    ***  *  *                                                                                   :
7eld_A_1     443:CTIK-DRKELEKHVPMPSEI--------------------------------------------------------------------------------: 461
SecStr          :    -TTTTTTSS     EE--------------------------------------------------------------------------------:    
ExpBur          :bebe-eeebbeeebbebeee--------------------------------------------------------------------------------:    

queryA       540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETI----------: 629
                :                                                                                                    :
7eld_A_1     462:------------------------------------------------------------------------------------------VVEYDKAATM: 471
SecStr          :------------------------------------------------------------------------------------------EEESSSS   :    
ExpBur          :------------------------------------------------------------------------------------------eeebbeeeee:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
7eld_A_1     472:WSLHETIKQMIAAVEEAAQASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAANLIHKLRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVD: 571
SecStr          : HHHHHHHHHHHHHHHHHHHH -------------------------------- HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HH:    
ExpBur          :beebeeebeebbeebeebeeee--------------------------------eeeebbebbebbbebbebbbbbbbbbbbebbbebbeebbeeeeeee:    

queryA       630:------------------------------------------------------------------------------------------------TILF: 633
                :                                                                                                 * *:
7eld_A_1     572:VKFQESYLSEVVSLLQCELLEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLIKLLLKYQHTADFR-AIVF: 670
SecStr          :HHHHHHHHHHHHHHHHHHHHHH --------------------------------------------------------  HHHHHHHHGGG   -  BB:    
ExpBur          :beebbeebeebbeebbeebeeee--------------------------------------------------------bbeebbeebeeeeeee-bbbb:    

queryA       634:VKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRA: 733
                :*        *       * ***       *    *    *           *   *    * ***** ** ** *** *        *   ** *** * :
7eld_A_1     671:VERVVAALVLPKVFAELPSLSFIRCASMIGH---NNSQEMKSSQMQDTISKFR-DGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARK: 766
SecStr          : SSHHHHHHHHHHHHHTT         SS S---TTSS   HHHHHHHHHHHH-SHHHHHH  B SS  S    S SB  BSS  S HHHHHHHHHH  S:    
ExpBur          :beeebbbbbbbebbeeeeeeebeebbeeeee---eebeebebeebbebbeebe-eeebbebbbbbeebeebebeebbbbbbbebeeebbbbbbbebbbee:    

queryA       734:RGSKCFLLTSNAGV: 747
                : **   *      *:
7eld_A_1     767:PGSDYILMVERGNV: 780
SecStr          :TT BEEEEE TTTT:    
ExpBur          :eeebbbbbebeeee:

Protein Model on 7eld_A_1 (TEMPLATE: 7eld )

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