Protein Model on 5jbj_A_1 (TEMPLATE: 5jbj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [627 aa] LGP2 :G0YYQ5_CHICK
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5jbj_A_1 identity=33.5%
queryA       245:NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVYEQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENN: 341
                : ****   **  * * *   *** ***      *  **     *  *  *    *      *      * *   *    **  **         *     :
5jbj_A_1      11:GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLVQQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGS: 103
SecStr          :HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHH----HT SS  EEEEESSSHHHHHH---HHHTGGGGGGTS EEEE STT SSS HHHHHHH :    
ExpBur          :eebeebbebbeeeebbbbbbeeeeebbebbbbbbbebb----eeeeebbbbbbbeeeebbeeb---beebbeebeeebebeebbbeeeeeeebbeebeeb:    

queryA       342:DIIILTPQILVNNLKKGTIPS---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 438
                :*  * * *** * *  *       *  * *   **** * *   ** **  **  ** *    ***  ***** * *       *   *   ** **  *:
5jbj_A_1     104:DVVICTAQILQNALLSGEEEARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGETSFEGAVEHILQICANLDTEV: 202
SecStr          :SEEEEEHHHHHHHHH SSTTT   STT SEEEEETGGG STT HHHHHHHHHHHHHHTT  -   EEEEEES    SS  SHHHHHHHHHHHHHHTT SE:    
ExpBur          :ebbbbbbebbbebbeeeeeebebebeebbbbbbbebbebeeeeebbebbbebbeeeeeeee-ebbbbbbbbbebbeeeeeeeebbbebbbebbbbbbbee:    

queryA       439:IATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL: 538
                :**                         *  * *       *         *    *     **  **** *** **                * * *   :
5jbj_A_1     203:IASAXXXXXXXXXXXXXXXXXXXXXXXREQDPFGQRLKKIM-------AQIQEHMEMPELPQN--FGTQVYEQRIV---------ELENRAAE-RFCRKT: 283
SecStr          :EE  -----------------------    HHHHHHHHHH-------HHHHHHHT SS    -- SSHHHHHHHH---------HHHHHHHH-HT HHH:    
ExpBur          :bbee-----------------------eeeeebbeebeebb-------eebbeebeeeebbee--beeeebbeebe---------ebbeebbe-eeeeeb:    

queryA       539:FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRA: 638
                :     *** ***** *    ** **   *  *         *  *  *   ***    *     *    ** *  *  ****          * * *** :
5jbj_A_1     284:RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXXDPTERFLATTFEENRATLQALAGDQRYXNPRLSKLEEILQEHFQPPGSSRGIVFTKTRQ: 382
SecStr          :HHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHT- ---- HHHHHHHHHHHHHHHHHHHHHH S  - HHHHHHHHHHHHHT STT   EEEE SSHH:    
ExpBur          :bbbbebbeebbbbbebbeebbbebbbebbeeebee-e----eebeeebeebbeebeeebeebbeeeeb-bebbeebeebbeeebeeeeebbbbbbbeeee:    

queryA       639:LVDALKNWIEGNPKL--SFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGS: 736
                :    *  *      *         *** *  **  ***   *      *   *  * *  **** ** **  ** *  *    * * * *  ** **  *:
5jbj_A_1     383:SAHSLLSWLQDTAGLCGQHIRAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQAQGRARAQNS: 481
SecStr          :HHHHHHHHHHT TTTTTS   EEEE  S B SS B   HHHHHHHHHHHH-TTS  EEEE TTSSSS   TT  EEEE S    HHHHHHHHTT  SSS :    
ExpBur          :bbebbeebbeebeebeebebeebbbbeeeeeeeeeebeeeebeebbeebe-eeebbbbbbbeebbeebebeebebbbbbebeeeeebeeebeebbeeeee:    

queryA       737:KCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC: 829
                :    *   *                *   *   *   *   * **   *         *  * *       **       *  *    *   * *  *  :
5jbj_A_1     482:MYSVLAKANXXXXXXXXXXXXXXXLMERAIRAVQAMPERKYRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM: 579
SecStr          :  B      --------------- HHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS TT--T EEEETTT  EEEEGGGEEEETTT:    
ExpBur          :eeeebeeee---------------ebeebbeebeeeeeeebeeebeebbeebbeebeeeeeeeeeeeeebebe--ebebbbbebbeebbebebbbbbeee:    

queryA       830:HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHF: 913
                :*       *           *     *   *    * *    *   **    *     *   *  ***          * **    *:
5jbj_A_1     580:HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPILSIKNFVV--VTPDEKKKYKKWSTVTF: 661
SecStr          :EEEE  GGGGGTEEEEEEE   S-   SS  EEEEEEET--TT  EEEEEEEETTEEEEEE GGGEEE--E SS EE  S STT SS:    
ExpBur          :ebbbbeeebeeebeeeeeeeeee-eeeeebebbbebbbe--eeeeebebbbebeebebbbbebebbbb--bbeeeeeebeebeebbb:

Input Residue Numbers for Focused Sites

ex) 2,15,123