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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [653 aa] | LGP2 :G0YYQ5_CHICK |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5jaj_A_1 identity=34.4% |
queryA 245:NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVYEQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENN: 341 : **** ** * * * *** *** * ** * * * * * * * * ** ** * : 5jaj_A_1 12:GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLVQQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGS: 104 SecStr :HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHH----HTSSS EEEEESSHHHHHHH---HHHTGGGGGGTS EEEE TTTTTSS HHHHHHT : ExpBur :eebeebbebbeeeebbbbbbeeebebbebbbebbbebb----eeeeebbbbbbbeeebbbebb---beebbeebeeebebbebbeeeeeeeebbeebeeb: queryA 342:DIIILTPQILVNNLKKGTIPS---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 438 :* * * *** * * * * * * **** * * ** ** ** ** * *** ***** * * * * ** ** *: 5jaj_A_1 105:DVVICTAQILQNALLSGEEEARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGETSFEGAVEHILQICANLDTEV: 203 SecStr :SEEEEEHHHHHHHHH STTT GGG SEEEETTGGG STTSHHHHHHHHHHHHHHTT - EEEEEES TT SHHHHHHHHHHHHHHTT SE: ExpBur :ebbbbbbebbbebbebeeeebebebeebbbbbbbbbbebbeeeebbebbbebbeeeeeeee-ebbbbbbbbbbbbbeeeeeeebbbebbbebbbbbbbee: queryA 439:IATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL: 538 :** * * * * * * * * ** **** *** ** * * * : 5jaj_A_1 204:IASAQXXXXXXXXXXXQPTKQYDLCQEREQDPFGQRLKKIM-------AQIQEHMEMPELPQN--FGTQVYEQRIV---------ELENRAAE-RFCRKT: 284 SecStr :EE ----------- EEEEEEE S HHHHHHHHHH-------HHHHHHHT TT -- SSHHHHHHHH---------HHHHHHHH-TT HHH: ExpBur :bbbee-----------eeeeeebebeebeebebbeebeebb-------eebbeebeeeebeee--beeeebbeebe---------ebbeebbe-eeeeeb: queryA 539:FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRA: 638 : *** ***** * ** ** * * * * * *** * * *** * * **** * * *** : 5jaj_A_1 285:RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYADXXXXK-DPTERFLATTFEENRATLQALAGDQRYENPRLSKLEEILQEHFQXXGSSRGIVFTKTRQ: 383 SecStr :HHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHH ---- - HHHHHHHHHHHHHHHHHHHHHT GGG HHHHHHHHHHHHH -- EEEE SSHH: ExpBur :bbbbebbeebbbbbebbeebbbebbbebbeeeeee----e-eebeeebeebbeebeeebeebbeeeebebebbeebbebbeeebe--eebbbbbbbeeee: queryA 639:LVDALKNWIEGNPKL--SFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGS: 736 : * * * *** * ** *** * * * * * **** ** ** ** * * * * * * ** ** *: 5jaj_A_1 384:SAHSLLSWLQDTAGLCGQHIRAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQAQGRARAQNS: 482 SecStr :HHHHHHHHHHT TTTTTS EEEE S SS HHHHHHHHHHHH-TTSS EEEE GGGSSS TT EEEEES HHHHHHHHTT STT : ExpBur :bbebbbebbeebeebeebebebbbbbbeeeeeebeebbbeebbebbeebb-ebebbbbbbbebbbbbbebeebebbbbbebebebbbbbbbebbbeeeeb: queryA 737:KCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC: 829 : * * ** * * * * * * ** * * * * ** * * * * * * : 5jaj_A_1 483:MYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERKYRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM: 580 SecStr :EEEEEEETT HHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS GG--G EEEETTT EEEEGGGEEEETTT: ExpBur :bbbbbbbeebeebeebeebeebbebbeebbeebeebeeeebeeebeebbeebbeeeeeeeeeeeeeeeebeee--ebebbbbbbeeebbebbbbbbbeee: queryA 830:HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHF: 913 :* * * * * * * * ** * * * *** * ** *: 5jaj_A_1 581:HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPILSIKNFVV--VTPDEKKKYKKWSTVTF: 662 SecStr :EEEE TTGGGTEEEEEEE S-S SSEEEEEEEEET--TT EEEEEEEETTEEEEEE GGGEEE--E SS EE S GGG SS: ExpBur :ebbbeeeebeeebeeeeeebeee-eeeeebebbbebbbe--eeebebeebbebeebebbbbebebbbb--bbeeeeebbeebeebbb: |