[pdbjlvh2]Protein Model on 4a2p_A

Protein Model on 4a2p_A_1 (TEMPLATE: 4a2p )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [479 aa]	RETINOIC ACID INDUCIBLE PROTEIN I :D3TI84_ANAPL

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4a2p_A_1 identity=50.8%

queryA       244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDI: 343
                :* ** *** **  ***  ****** ****** ******    * * * **** *   ******* **   *** ** * ****       **   *  **:
4a2p_A_1       9:RSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDI: 108
SecStr          : HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHT  SS    EEEE SSHHHHHHHHHHHHHHHGGGT  EEE    ----- HHHHHHH SE:    
ExpBur          :eebbebbbebbeeeebbbbbbeeebebbebbbbbbeebbeeeeeeeebbbbbbbeeeeebeebeeebeeebeeeeeebeebeee-----ebeebbeebeb:    

queryA       344:IILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIATVK: 443
                :*  *******    **  ****************   ****  *  ** **   *   ***  ********* ***  *    ** **  **   * ** :
4a2p_A_1     109:IVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSXXXLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAISTVR: 207
SecStr          :EEE HHHHHHHHHSSS   STT SEEEEETGGG STTSHHHHHHHHHHHHHH-  ---  EEEEEES    TT SSHHHHHHHHHHHHHHHT SEEE   :    
ExpBur          :bbbbbebbbebbeeeebeebeebbbbbbbebeebeeeebbbebbbbbbebee-ee---ebbbbbbbeebebeeeeeeeebbeebbebbbebbbebbbbbe:    

queryA       444:HNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTS: 543
                : *  **     **    * *  **   *  **  **  ** *   *              **** ** ***  *  *      ** ****** ***  * :
4a2p_A_1     208:ENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTI-YSXXXXXXXXXKDFGTQNYEHWIVVTQRKCRLLXXXDKEEESRICRALFICTE: 306
SecStr          :TTHHHHHHHT    EEEEE    S  HHHHHHHHHHHHHHHHHHHH-  ---------   SSHHHHHHHHHHHHHHHH --- HHHHHHHHHHHHHHHH:    
ExpBur          :eeeebbeeebeeeebeeeebeebeebebbebbeebbeebbeebeee-be---------eebeeeebeeebeebbeebeee---eeeeeeeebebbebbbe:    

queryA       544:HLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL: 643
                :************* **  *** **  ** **      * ** **  * **  **   * *  ******* *  **   *  ** * * ** ****** **:
4a2p_A_1     307:HLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSAL: 406
SecStr          :HHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS   HHHHHHHHHHHTTHHHHHHHHH SSS  HHHHHHHHHHHHHHHH TT  EEEEESSHHHHHHH:    
ExpBur          :bbbebbbbbbbbebbbbebbbebbeebbeebeeeeeeebbeebbeebeeebeebeeebeeeeeebebbeebbebbeebbeeeeebebebbbebebbbebb:    

queryA       644:KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS: 743
                :*   * ** *   ***                                  *****           *** **** *** ****         *** * **:
4a2p_A_1     407:KKCMEENPILNYIKPGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLLIATSXXXXXXXXXXXNLVVLYEYSGNVTKMIQVXXXXXXXXSKCILVTS: 506
SecStr          :HHHHTT SGGGS  EE ------------------------------  EEEEE ----------- EEEEET  S HHHHHH --------  EEEEES:    
ExpBur          :eebbeeeeebeebebbe------------------------------eebebeee-----------ebebbbbeeeebeebeee--------eebbbbbb:    

queryA       744:NAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRD: 792
                :   * * *  * *** ***      * ***  *  **   *  *   **:
4a2p_A_1     507:KTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRD: 555
SecStr          : HHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHTT :    
ExpBur          :eeebbeebeeeeeeeebbeebbeebbeeeeeebeeebeebbeeeeeeee:

Protein Model on 4a2p_A_1 (TEMPLATE: 4a2p )

Input Residue Numbers for Focused Sites