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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [479 aa] | ATP-dependent RNA helicase, putative :Q8TZH8_PYRFU |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1wp9_A_1 identity=28.8% |
queryA 241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IV: 338 : ** ** * * * * *** *** * * * * *** * * * * * * * * * : 1wp9_A_1 8:IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAW: 99 SecStr :H HHH-HHHHHHGGGS EEEE TTS HHHHHHHHHHHHHHHS---- S EEEE SSHHHHHHHHHHHHHHB S GGGEEEE S--- S HHHHHHHH: ExpBur :beeeebb-eebbeebeeeebbbbbeeebebeebbbbbbbbbbeee----eebbbbbbbeeebbeebbeebeebbebeeeebbbbbe---eeeeeebeebb: queryA 339:ENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 438 : * *** * * * * ** * *** * * * * * ** ******* * * * * : 1wp9_A_1 100:ARAKVIVATPQTIENDLLAGRI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK--------IMEVINNLGIEH: 184 SecStr :HH SEEEE HHHHHHHHHTTS - TTS SEEEEETGGG STT HHHHHHHHHHHH---- SS --EEEEES S SSHHH--------HHHHHHHTT E: ExpBur :eebebbbbbbebbeebbeeeeb-ebeebbbbbbbebeebbeeebbbbbbebbeee----beeeb--bbbbbeebeeeeee--------eeebbeebebee: queryA 439:IATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC: 535 :* * * * * ** * * * * * * * * : 1wp9_A_1 185:IEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLREMLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR--: 270 SecStr :EEE TTSTTTGGG EEEEEE HHHHHHHHHHHHHHHHH-------HHHHHHHTSSS TTS HHH-----HHHHHHHHHHHHTTT STT--: ExpBur :ebebeeebebbeeeeeeeebeeeebebeebbeebbebbbebbeeb-------bebbbeeebbeebebebeeeb-----beebbeebeeebeeeeeeee--: queryA 536:KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVK: 635 : * ** * * * * * * * * ** * * * * * : 1wp9_A_1 271:-GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAISLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTN: 369 SecStr :-THHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHTT HHHHHHHTSHHHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHHH TT EEEE S: ExpBur :-ebeeebebbebbbebbebbbbbbbebbeebbeebeeebeeeeeebbeebbeeeebeebeebbeebeeeebbbbbbeebbebbeebbeeeeebbbbbbbe: queryA 636:TRALVDALKNWIEGNPKLSFLKPGI----LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-: 730 : * * * ** * ** *** * * * * * **** ** * ** ** * * ** *** : 1wp9_A_1 370:YRETAKKIVN--------ELVKDGIKAKRFVGQASKXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRT: 460 SecStr : HHHHHHHHH--------HHHHTT EEEE SS ------- HHHHHHHHH-HHTS SEEEE GGGGGGGGSTT EEEESS HHHHHHHHHHTTS: ExpBur :eeebbeebbe--------bbeeeebebeebbbeeee-------eeeeeebbebb-eeeebbbbbbbeebeebbebeebbbbbbbbbbeebbebbeebbbe: queryA 731:GRARGSKCFLLTSNA: 745 :** * : 1wp9_A_1 461:GRHMPGRVIILMAKG: 475 SecStr : S SEEEEEEETT: ExpBur :eeeebeebbbbbbee: |