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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [661 aa] | Melanoma differentiation associated protein-5 :D9N195_CHICK | |
2 | b | I 1 (A) | non-polymer(MG) | MAGNESIUM ION | 271T (identity: 100.0 %/37.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5jch_A_1 identity=37.1% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENND: 342 :* ** * * ** * * *** *** *** * * ** ** *** * * ** * * * * * ** * *: 5jch_A_1 9:RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPLVEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYD: 108 SecStr : HHHHHHHHHHHHT EEEE TTS HHHHHHHHHHHHHHHHHHTT EEEEESSSHHHHHHHHHTHHHHHTTTS EEEE SSS SS HHHHHHH S: ExpBur :eebbebbbebbbeeebbbbbbeeebebbebbbebbeebbeeeeeeeeebbbbbbbeeeebbebbbeebbeebbeeebebbebbeeeeeeeebeebbeebe: Contact : b queryA 343:IIILTPQILVNNLKKGTIPS----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTASVGVGDAKNTDEALDYICKL: 430 : ** * *** * * ** * * * * ** * * ** ** ** * * ** ***** *** * * * * : 5jch_A_1 109:VIICTAQILENSLLNXXXXXESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTASPGVGGARSNSKAEEHILKI: 208 SecStr :EEEEEHHHHHHHHH ----- GGG SEEEEESGGG STT HHHHHHHHHHHHHHHHHHHHH --- EEEEEES SS SSHHHHHHHHHHH: ExpBur :bbbbbbebbbebbee-----eebebeebbbbbbbbbbebeeeeebbbbbbebbeeeeeeeeeeee---eeeebbbbbbbbbbbbeebeeeeebbebbbeb: queryA 431:CASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE: 530 :** *** * *** * * * * * * * * * * *** * **** : 5jch_A_1 209:CANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDPFRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR: 294 SecStr :HHHTT SEEEE TTHHHHHHHS EEEEEEE S HHHHHHHHHHHHHHHHHT SS---------- TTSHHHHHHHHHHHHHH----HHTT H: ExpBur :bbbbbbeebbebeeeeeebeeebeebeeeeeebeeeeeeebeeebbebbeebbebbebeeee----------ebbeeebeebbeeebeeb----beeeee: queryA 531:ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------AAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCF: 616 : * * ** ****** * ** ** * * ** * * * * * * * ** * : 5jch_A_1 295:KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDXXXXXXSKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRN: 388 SecStr :HHHHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHS S ------ HHHHHHHHHHHHHHHHHHHHHT GGGS HHHHHHHH: ExpBur :ebbbb------bebbbbbbbbbebbeebbbebbbebbbebbeebebbbeeeeee------ebeeebbeebbebbeebeeebeeebeeeeebbebbeebee: queryA 617:ILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVIL: 714 : * ** * * * *** ** ** *** * * * * ** * * * * * **** ** ** ** ** ** : 5jch_A_1 389:TLMEEFTKTEEPRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLLIATTVAEEGLDIKECNIVIR: 487 SecStr :HHHHHHSSSSS EEEE SSHHHHHHHHHHHHTSHHHHHHT EEEE S SSS HHHHHHHHHHHHH-TS EEEE GGGTSSS BSEEEE: ExpBur :bbeebbeeeeebbbbbbbeebebbebbbebbeeeeebeeeebebeebbbeeeeeeeeebeeeebeebbeebee-eebbbbbbbebbbbebebeebbbbbb: queryA 715:YEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK------: 807 :* * * * * * *** ** * * * * * * * * ** * * * ** * * * * * ** : 5jch_A_1 488:YGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDVNIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQS--IVEKQMKAKRDQRXXXKKNPSLIT: 585 SecStr :ES HHHHHHHHHHB STT EEEEEEETTTTHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHH--HHHHHHHHHHHT --- GGGEE: ExpBur :bebbeebbbbbbbbbbbeeeebbbbbbbbeeeebbeebeebeebbebbeebbeebeebeeeebeeebeebbeeb--beeeeeeeeeeee---eeeeeebe: queryA 808:LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTL: 904 : ** * * * * *** * * * * * * ** * * ** *** ** : 5jch_A_1 586:FLCKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC--KDCGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEI: 682 SecStr :EEETTT EEEEGGGEEEETTTEEEE TT GGGEEEE ---------- S EEEE--TTT EEEEEEESSS EEEEE GGGEEEEE ---- EE : ExpBur :bbbbbebbebbebebbebbeeeebbbeeeebeeebbebee----------eeeebbbb--eebbbbbbbbbeeeeeeebbbebebbbbbbee----eeeb: queryA 905:YSKWKDF: 911 : ** : 5jch_A_1 683:FKKWGEL: 689 SecStr : SSGGGS: ExpBur :beebeeb: |