[pdbjlvh2]Protein Model on 5jch_A_1_G

Protein Model on 5jch_A_1_G_1 (TEMPLATE: 5jch )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [661 aa]	Melanoma differentiation associated protein-5 :D9N195_CHICK
2	b		G 1 (A)	non-polymer(ZN)	ZINC ION	810C 813C 864C 869C (identity: 100.0 %/37.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5jch_A_1 identity=37.1%

queryA       244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENND: 342
                :* ** * * **  * * *** *** *** *   *   ** **      ***    *  *  **        *  * * * * **           *   *:
5jch_A_1       9:RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPLVEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYD: 108
SecStr          : HHHHHHHHHHHHT  EEEE  TTS HHHHHHHHHHHHHHHHHHTT    EEEEESSSHHHHHHHHHTHHHHHTTTS EEEE SSS  SS HHHHHHH S:    
ExpBur          :eebbebbbebbbeeebbbbbbeeebebbebbbebbeebbeeeeeeeeebbbbbbbeeeebbebbbeebbeebbeeebebbebbeeeeeeeebeebbeebe:    

queryA       343:IIILTPQILVNNLKKGTIPS----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTASVGVGDAKNTDEALDYICKL: 430
                : ** * *** * *           ** * * * * ** * *   ** **  **  *              * **  ***** *** *     *   * * :
5jch_A_1     109:VIICTAQILENSLLNXXXXXESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTASPGVGGARSNSKAEEHILKI: 208
SecStr          :EEEEEHHHHHHHHH -----    GGG SEEEEESGGG STT HHHHHHHHHHHHHHHHHHHHH ---     EEEEEES    SS SSHHHHHHHHHHH:    
ExpBur          :bbbbbbebbbebbee-----eebebeebbbbbbbbbbebeeeeebbbbbbebbeeeeeeeeeeee---eeeebbbbbbbbbbbbeebeeeeebbebbbeb:    

queryA       431:CASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE: 530
                :** ***  * ***     *   *  * *          * *   *   * *         *           *** * ****                  :
5jch_A_1     209:CANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDPFRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR: 294
SecStr          :HHHTT SEEEE  TTHHHHHHHS   EEEEEEE   S  HHHHHHHHHHHHHHHHHT   SS---------- TTSHHHHHHHHHHHHHH----HHTT H:    
ExpBur          :bbbbbbeebbebeeeeeebeeebeebeeeeeebeeeeeeebeeebbebbeebbebbebeeee----------ebbeeebeebbeeebeeb----beeeee:    

queryA       531:ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------AAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCF: 616
                :  * *        ** ****** *    ** **   *  *                       **    *   *  *   *    * *   * **  *  :
5jch_A_1     295:KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDXXXXXXSKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRN: 388
SecStr          :HHHHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHS  S  ------    HHHHHHHHHHHHHHHHHHHHHT GGGS HHHHHHHH:    
ExpBur          :ebbbb------bebbbbbbbbbebbeebbbebbbebbbebbeebebbbeeeeee------ebeeebbeebbebbeebeeebeeebeeeeebbebbeebee:    

queryA       617:ILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVIL: 714
                : * **     *   * * ***    **  **  ***      *   * * *       **   *    * *   *  * **** ** ** **  ** ** :
5jch_A_1     389:TLMEEFTKTEEPRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLLIATTVAEEGLDIKECNIVIR: 487
SecStr          :HHHHHHSSSSS  EEEE SSHHHHHHHHHHHHTSHHHHHHT  EEEE    S SSS    HHHHHHHHHHHHH-TS  EEEE GGGTSSS    BSEEEE:    
ExpBur          :bbeebbeeeeebbbbbbbeebebbebbbebbeeeeebeeeebebeebbbeeeeeeeeebeeeebeebbeebee-eebbbbbbbebbbbebebeebbbbbb:    

queryA       715:YEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK------: 807
                :*  * * * * * *** **  *   *   *  *  * *  *   * **   * * *         **   *     *   * * *       **      :
5jch_A_1     488:YGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDVNIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQS--IVEKQMKAKRDQRXXXKKNPSLIT: 585
SecStr          :ES    HHHHHHHHHHB STT EEEEEEETTTTHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHH--HHHHHHHHHHHT ---   GGGEE:    
ExpBur          :bebbeebbbbbbbbbbbeeeebbbbbbbbeeeebbeebeebeebbebbeebbeebeebeeeebeeebeebbeeb--beeeeeeeeeeee---eeeeeebe:    

queryA       808:LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTL: 904
                : **  *  * *   *  ***  *       *      *                 * *    *   **    *     *  **  ***  **        :
5jch_A_1     586:FLCKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC--KDCGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEI: 682
SecStr          :EEETTT  EEEEGGGEEEETTTEEEE  TT GGGEEEE  ----------  S EEEE--TTT  EEEEEEESSS EEEEE GGGEEEEE  ---- EE :    
ExpBur          :bbbbbebbebbebebbebbeeeebbbeeeebeeebbebee----------eeeebbbb--eebbbbbbbbbeeeeeeebbbebebbbbbbee----eeeb:    
Contact         :  b  b                                                   b    b                                     

queryA       905:YSKWKDF: 911
                :  **   :
5jch_A_1     683:FKKWGEL: 689
SecStr          : SSGGGS:    
ExpBur          :beebeeb:

Protein Model on 5jch_A_1_G_1 (TEMPLATE: 5jch )

Input Residue Numbers for Focused Sites