Protein Model on 8g7u_A_1_E_1 (TEMPLATE: 8g7u )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [647 aa] Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2 b E 1 (X) polymer(polyribonucleotide) p3dsRNA24a 379K 380Q 381H 415G 498Q 500Q 507Q 511Q 750K 829C 830H 847H 853F 858K 861K 874G 875I 886V 888K 908W 909K (identity: 100.0 %/94.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8g7u_A_1 identity=94.7%
queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
8g7u_A_1     241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
SecStr          :    HHHHHHHHHHTTT  BEEE S SHHHHHHHHHHHHHHHHT  TT    EEEE  SHHHHHHHHHHHHHHTTTTS       GGGSSSS HHHHHHT:    
ExpBur          :eeeeebbeebbeebeeeebbbbbbebeebbbebbbbbbeebbeebeeeeebebbbbbeeeeebeebeeebeeebeeeebebebbbeeeeeeeeeeebbee:    

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
8g7u_A_1     341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
SecStr          : SEE   HHHHHHHHHHSSSSSGGG SBEEEESGGG SSS HHHHHHHHHHHHHTTS      B  EEES     S  SHHHHHHHHHHHHHTTT SB  :    
ExpBur          :bbbbbbbbebbeebeeeeebeebeebebbbbbebbebeeeebbbebbbebbebeeeeeeeeebebbbbbeebbbeebeebeebbebbbebbbbbbbbbeb:    
Contact         :                                      bbb                                 b                         

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :****************************************************************************************************:
8g7u_A_1     441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
SecStr          :   S HHHHHHS      EEEE    S  SHHHHHHHHHHHHHHHHTTS  THHHHS   S  TTSHHHHHHHHHHHHHHTT   TTSSHHHHHHHHHHH:    
ExpBur          :bbeebeeeeeebbbeeeeeeeebeebeeeebeebbbebbeebbeebeeebeebeeebebeeeeebeeebeebbeebbebbbeeeeeeeeebbebbbbbbb:    
Contact         :                                                         b b      b   b                             

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
8g7u_A_1     541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
SecStr          :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHTT GGG  HHHHHHHHHHHHHHHH TT  EEEEESSSHHH:    
ExpBur          :bbebbeebbebbebbebbbbebbbeebeebbeebeeebeeebbeebbeebeeebeebeebbeeeebebbbbeebbebbeebbeeeeebebbbbbeeeebb:    

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :**********************                           **********      *************   *******************:
8g7u_A_1     641:DALKNWIEGNPKLSFLKPGILTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXXXIKMIQTRGRGRARGSKCFL: 740
SecStr          :HHHHHHHTT STT S       ---------------------------  SEEEE   ------  SS BEEEES  ---       SS      B EE:    
ExpBur          :ebbbebbeebeebeebeeeeee---------------------------eebbbbbbee------eeebebbbbbbee---eeeebbeeeeeeeebebbb:    

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :****************************************************************************************************:
8g7u_A_1     741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
SecStr          :EESSHHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH          S  EEE TTT  EEEESSSEEESSSS EEE  STGGG:    
ExpBur          :bbeeeebeeeeeeeeebeebbeebbeebeeeeeeebeeebeeebeeeeeebeeeeeeeeeeeeeebbbbbbbbbbebbebeebbbbeeebbbbebeebee:    
Contact         :         b                                                                              bb          

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
                :***********************************************************************************:
8g7u_A_1     841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
SecStr          :SEEEEE SS    SS  EEEEEEE SSS   B EEEE SSSS EEEE GGG EEE SSS  EE   SGGG  S  EE   S  :    
ExpBur          :ebeeeebeeeeeeebbebebebebeeeebebebbbbbeeeebebbbbebebbbbbbeeebebeeeeebeebebeeeebeeeee:    
Contact         :      b     b    b  b            bb          b b                   bb

Input Residue Numbers for Focused Sites

ex) 2,15,123