[pdbjlvh2]Protein Model on 8dvs_A_1_E

Protein Model on 8dvs_A_1_E_1 (TEMPLATE: 8dvs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [682 aa]	Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2	b		E 1 (A)	non-polymer(ADP)	ADENOSINE-5'-DIPHOSPHATE	241F 242K 244R 247Q 266T 267G 268C 269G 270K 271T (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8dvs_A_1 identity=100.0%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
8dvs_A_1     241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
SecStr          :    HHHHHHHTTTTTTS B  B  TTS HHHHHHHHHHHHTTSS TT     EEE SSHHHHHHHHHHHHHHHTTTT  EE   TTT SSS HHHHHHT:    
ExpBur          :eeeeebbebbbeebeeeebbbbbbeeebebebbbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeeeeeeebeeebee:    
Contact         :bb b  b                  bbbbbb                                                                     

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
8dvs_A_1     341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
SecStr          : SEE   HHHHHHHHHTTS S GGG SEEEEBTGGG  SS HHHHHHHHHHHHHTTS   S  EE  BBS    SS  SHHHHHHHHHHHHHHHT  B  :    
ExpBur          :bbbbbbbbebbbebbeeebbeebeebebbbbbbbbbbeeeebbbebbbebbebeeeeeeeebbbbbbbbbbbbbeebeeeeebbeebbebbbbbbbbbbb:    

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :****************************************************************************************************:
8dvs_A_1     441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
SecStr          :   TTHHHHTTTS   B  EEE    S  HHHHHHHHHHHHHHHHHHHH TT TTSS   S  TTSHHHHHHHHHHHHHHHT   TTSSHHHHHHHHHHH:    
ExpBur          :ebeeeeeebeeebeebebeeeebeebeeeebeebbbebbeebbebbeeebeebeeebebeebebbeeebeebbeebbeebbeeeeeeeeebeebbbbbbb:    

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
8dvs_A_1     541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
SecStr          :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS   HHHHHHHHHHHHHHHHHHHHHH GGG  HHHHHHHHHHHHHHHH SS  B  EES HHHH:    
ExpBur          :bbebbeebbbbbebbebbbbebbbeebeebbeebeeeeeeebbeebbebbeeebeebeebbeeeebebebbeebbebbeebbeeeeebbbbbbbeeeebb:    

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :****************************************************************************************************:
8dvs_A_1     641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
SecStr          :HHHHHHHHT TT  S  B  B     TTSS S  HHHHHHHHHT SSSSS SB  B GGGSSS      SEEEEES    HHHHHHHHTT  SSS EEEE:    
ExpBur          :ebbeebbeebeebeebebbbbbbeeeeeeeeebeeeebeebbebbeeeeebbbbbbbebbbeebebeebbbbbbbbbeeebbebbbbbbbbebeebebbb:    

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
                :****************************************************************************************************:
8dvs_A_1     741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840
SecStr          :EES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH        B S EEEEETTT  EEEESTTEEESSSS EEE SHHHHT:    
ExpBur          :bbbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeebeeeeeeeeeeeeeebbbbbbbbbbebbebeebbbbeeeebbbeeeebee:    

queryA       841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
                :**********************************************************************************:
8dvs_A_1     841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922
SecStr          :TEEEEE SS   SSS    EEEEE SSS   B EEEEESSSSEEEEE GGGEEEEESSS  EEE SSGGG  B  EE  S  :    
ExpBur          :ebeeeebeeeeeeeebebebbbbbeeeebebebbbbbebeeeebbbbebebbbbbbeeebebeeeeebeebebeeeebeeee:

Protein Model on 8dvs_A_1_E_1 (TEMPLATE: 8dvs )

Input Residue Numbers for Focused Sites