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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [670 aa] | LGP2 :G0YYQ5_CHICK | |
2 | b | E 1 (A) | non-polymer(ADP) | ADENOSINE-5'-DIPHOSPHATE | 247Q 265P 266T 267G 268C(A) 269G 270K 271T 272F(R) 313Y(E) 705D 732R (identity: 75.0 %/34.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5jb2_A_1 identity=34.6% |
queryA 245:NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVYEQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENN: 341 : **** ** * * * *** *** * ** * * * * * * * * ** ** * : 5jb2_A_1 11:GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLVQQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGS: 103 SecStr :HHHHHHTHHHHTT EEEE TTS HHHHHHHHHHHHH----HTSSS EEEEESSTHHHHHH---HHHTGGGGGGTS B TTTGGGS HHHHHHT : ExpBur :ebbebbbebbeeeebbbbbbeeebebbebbbbbbbebb----eeeeebebbbbbeeebbbebb---beebbeebeeebebeebbeeeeeeeebbeebeeb: Contact : b bbbbbbbb b queryA 342:DIIILTPQILVNNLKKGTIPS---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 438 :* * * *** * * * * * * **** * * ** ** ** ** * *** ***** * * * * ** ** *: 5jb2_A_1 104:DVXICTAQILQNALLSGEEEARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGETSFEGAVEHILQICANLDTEV: 202 SecStr : - EEHHHHHHHHH STTT GGG SEEEETTGGG STTSHHHHHHHHHHHHHHTT - EEEEEES TT SHHHHHHHHHHHHHHTT SE: ExpBur :eb-bbbbebbbebbebeeeebebebeebbbbbbbbbbebeeeeebbebbbebbeeeeeeee-ebbbbbbbbbbbbbeeeeeeebbbebbbebbbbbbbee: queryA 439:IATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL: 538 :** * * * * * * * * * * ** **** *** ** * * : 5jb2_A_1 203:IASAQEHAQHLQSHVPQPTKQYDLCQEREQDPFGQRLKKIM-------AQIQEHMEMPELPQN--FGTQVYEQRIVELENRAA----------ERFCRKT: 283 SecStr :EE STTHHHHHTTS EEEEEEE S HHHHHHHHHH-------HHHHHHHT SS -- SSHHHHHHHHHHHHHHH----------HTT HHH: ExpBur :bbbbeeeeeebeeebeebeeeebebeebeebbbbeebeebb-------eebbeebeeeebeee--beeeebbeebeebbeebb----------eeeeeeb: queryA 539:FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRA: 638 : *** ***** * ** ** * * * * * *** * * *** * * **** * * *** : 5jb2_A_1 284:RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXKDPTERFLATTFEENRATLQALAGDQRYENPRLSKLEEILQEHFQPPGSSRGIVFTKTRQ: 382 SecStr :HHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHH - --- HHHHHHHHHHHHHHHHHHHHHT GGG HHHHHHHHHHHHHS STT EEEE SSHH: ExpBur :bbbbebbeebbbbbebbeebbbebbbebbeebbee-e---eeebeeebeebbeebeeebeebbeeeebebebbeebbebbeeebeeeeebbbbbbbeeee: queryA 639:LVDALKNWIEGNPKL--SFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGS: 736 : * * * *** * ** *** * * * * * **** ** ** ** * * * * * * ** ** *: 5jb2_A_1 383:SAHSLLSWLQDTAGLCGQHIRAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQAQGRARAQNS: 481 SecStr :HHHHHHHHHHT TTTTTS EEEE S SS HHHHHHHHHHHH-TTSS EEEE GGGSSS TT EEEEES HHHHHHHHTT STT : ExpBur :bbebbbebbeebeebeebebebbbbbbeeeeeebeebbeeebbebbeebb-ebebbbbbbbebbbbbbebeebebbbbbebeeebbbbbbbbbbbbbeeb: Contact : b b queryA 737:KCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC: 829 : * * ** * * * * * * ** * * * * ** * * * * * * : 5jb2_A_1 482:MYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERKYRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM: 579 SecStr :EEEEEEETT HHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS GG--G EEEETTT EEEEGGGEEEETTT: ExpBur :bbbbbbbeebeebeebeebeebbebbeebbeebeebeeeebeebbeebbeebbeeeeeeeeeeeeeeeebeee--ebebbbbebeeebbebebbbbbeee: queryA 830:HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHF: 913 :* * * * * * * * ** * * * *** * ** *: 5jb2_A_1 580:HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPILSIKNFVV--VTPDEKKKYKKWSTVTF: 661 SecStr :EEEE TTGGGTEEE SS S-S SSEEEEEEEEET--TT EEEEEEEETTEEEEEE GGGEEE--E SS EE S STT SS: ExpBur :ebbbeeeebeeebeeeeeeeeee-eeeeebebbbebbbe--eeebebeebbebeebebbbbebebbbb--bbeeeeebbeebeebbb: |