[pdbjlvh2]Protein Model on 4on9_A_1_E

Protein Model on 4on9_A_1_E_1 (TEMPLATE: 4on9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [514 aa]	Probable ATP-dependent RNA helicase DDX58 :DDX58_HUMAN
2	b		E 1 (B)	non-polymer(SO4)	SULFATE ION	488R (identity: 100.0 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4on9_A_1 identity=93.1%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340
                :****************************************************************************************************:
4on9_A_1      28:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 127
SecStr          :    HHHHHHHHHHHTT  EEEE  TTSSHHHHHHHHHHHHHHTS TT    EEEE SSHHHHHHHHHHHHHHHHTTT  EEEE SS  SSS HHHHHHH:    
ExpBur          :eeeeebbeebbeebbeeebbbbbbeeebebebbbbbbbbebbeeeeeeeebbbbbbbeeeebbeebeeebbeebeeeebebebbbeeeeeeeebeebbee:    

queryA       341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440
                :****************************************************************************************************:
4on9_A_1     128:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 227
SecStr          : SEEEE HHHHHHHHHHTSS  STT SEEEETTGGG STT HHHHHHHHHHHHHHSSS     EEEEEES    TT SSHHHHHHHHHHHHHHTT SEEE:    
ExpBur          :bbbbbbbbebbbebbeeeebebbeebebbbbbebeebbeeeebbebbbebbebebeeeeeeebbbbbbbeebebeebeeeeebbeebbebbbbbbbbbbb:    

queryA       441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540
                :******************************************************  **************************     *************:
4on9_A_1     228:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLEXXSQIQNREFGTQKYEQWIVTVQKACMVXXXXXKDEESRICKALFL: 327
SecStr          :   TTHHHHHHHS   EEEEEE    S  HHHHHHHHHHHHHHHHHHHHSTT  --    S  TT HHHHHHHHHHHHHHH ----- HHHHHHHHHHHH:    
ExpBur          :ebeeeeebbeeebeebeeeeeebeebeebebeebbbebbeebbeebeeebeebe--eeeeebebeeeebbebbebbbeebee-----eeeeeeeeebbeb:    
Contact         :                                               b                                                    

queryA       541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640
                :****************************************************************************************************:
4on9_A_1     328:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 427
SecStr          :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS   HHHHHHHHHHHHHHHHHHHHHH GGG  HHHHHHHHHHHHHHHH TT  EEEE S HHHH:    
ExpBur          :bbebbeebbbbbbbbebbbbebbbeebeebbeebeeeeeeeebeebbeebeeeeeebeebeeeeebebebbeebbebbeebbeeeeebebbbbbebebbb:    

queryA       641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740
                :*********************                       ******************************************        ******:
4on9_A_1     428:DALKNWIEGNPKLSFLKPGILXXXXXXXXXXXXXXXXXXXXXXXFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQXXXXXXXXGSKCFL: 527
SecStr          :HHHHHHHHH GGGTT  EEE -----------------------  S SS SEEEE    SSS EEEESSEEEEES  SS EEEE --------  EEEE:    
ExpBur          :ebbeebbeebeebeebebbee-----------------------eeeeeeebbbbbeeeeeeeeeebebebbbbbbbeebeeebee--------ebbbbe:    

queryA       741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRD: 792
                :****************************************************:
4on9_A_1     528:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRD: 579
SecStr          :EES HHHHHHHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHH :    
ExpBur          :bbeeeeebeeeeeeeeeeebbeebbeebeeeeeeebeeebeebbeeeeeeee:

Protein Model on 4on9_A_1_E_1 (TEMPLATE: 4on9 )

Input Residue Numbers for Focused Sites