[pdbjlvh2]Protein Model on 7niq_A_1_D

Protein Model on 7niq_A_1_D_1 (TEMPLATE: 7niq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (B)	polymer(polypeptide(L)) [673 aa]	Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE
2	b		D 1 (B)	non-polymer(ADP)	ADENOSINE-5'-DIPHOSPHATE	244R 247Q 265P 266T 267G 268C(S) 269G 270K 271T 272F(R) 705D (identity: 81.8 %/37.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7niq_A_1 identity=37.8%

queryA       244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :* ** * * **  *** *** *** *** *   *   ** *  *    ***    *     **     *  *     **  * ** *         *   :
7niq_A_1     310:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 408
SecStr          : HHHHHHHTTTTSS     B  SSSSHHHHHHHHHHHHHHHHHHTT    EEEEESSHHHHHHHHHHTHHHHHTT-TS  EE  SSS  SS HHHHTTTT:    
ExpBur          :eebbebbbeebbeeebbbbbbeeebebeebbbebbbebbeebeeeeeeebbbbbbeeebbbebbeeeebbeebee-ebebbbbbeeeeeeeebeebbeee:    
Contact         :b  b                 bbbbbbbb                                                                       

queryA       342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428
                :* ** * *** *   **  *      ** * * * **** * *   ** **  ** ***             ****  ***** *** **   **   * :
7niq_A_1     409:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 508
SecStr          :SEEEEEHHHHHHHHHHHHHTSS    GGG SEEEES GGG  TT HHHHHHHHHHHHHHHHHHHHTT S      EE   BS    SS SSHHHHHHHHH:    
ExpBur          :bbbbbbbebbbebbeeeeeeeeebbebeebebbbbbbbbebeeeeebbbbbbebbebeeebeeeeeeeeeeeeebbbbbbbebbbbeebeeeeebbeebb:    

queryA       429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528
                :  ** ***  * *** **  *      * * *          **      *                        **** ****     *        * :
7niq_A_1     509:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRENPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 594
SecStr          :HHHHHHT S      STHHHHHHHS   EEEEEE    S HHHHHHHHHHHHHHHHHTT   SS---------- SSSSHHHHHHHHHHHHH----HHHT:    
ExpBur          :ebbbbbbbeebeebeebeeebeeeeeeeeeeebebeeeebeebbeebeebbeebeeebebeeee----------eeeeeebbebbeebbeeb----beee:    

queryA       529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------------------------DEIEQDLTQRFEEKLQELE: 598
                :    * *        ****** ** *    ** **   *  *        *                              **    *   *      * :
7niq_A_1     595:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXXXXXXXXXXXXXXXXXXXXXXXDETDEFLMNLFFDNKKMLK: 688
SecStr          : TTTHHH------HHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHHHH -------------------------- HHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeebbb------bebbbbbbebbebbeebbbebbbebbbebbeeeeebeeeeee--------------------------eebbeebbebbeebeeebe:    

queryA       599:SVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILI: 695
                :     *     **  *     *           * * ***    **  **  * *      *   * * *       **   **     *   *  * **:
7niq_A_1     689:KLAENPKXXXEKLIKLRNTILEQFTRSEXXXRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLI: 787
SecStr          :HHHTS  --- HHHHHHHHHHHHHHHH --- EEEE S HHHHHHHHHHHHH HHHHHHT   EE   BS  SSS  B HHHHHHHHHHHH-TTS SSEE:    
ExpBur          :eebeeee---ebbeebbebbbebbeeee---ebbbbbeebebbebbbeebeeeeebeeeebeeebbbbeeeeeebeebeeeebeebbeebe-eeebebbb:    

queryA       696:ATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR: 791
                :** ** ** **  ** ** *  * * * * * *** **  *   * **   ** * *  *   ***    * * *         ***  *     **   :
7niq_A_1     788:ATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQVQSILEKKMK: 887
SecStr          :E GGGGS    S EEEEEEES    HHHHHHHHHTTEEEEEEEEEEE SSSSHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbeebbbebebeebebbbbbbbbeebbbbbbbbebbbbeebebbbbbbeeeebeeebeebeebbebbeebbeebeebeeeebeeebeebbeebbeeeeee:    
Contact         :         b                                                                                          

queryA       792:DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKI: 889
                :      *   *      ***  *  * *      ***  *       **     *                 * *    *   **     *    *  **:
7niq_A_1     888:VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC---KCGQAWGTMMVHKGLDLPCLKI: 984
SecStr          :HHHHHHHS    SS EEEE SSS  EEEETTT EEETTTEEE  STTTTTT EEE   ----------   EEE ---SSS EEEEEEEETTEEEEEE G:    
ExpBur          :eeeeeeeeeeeeeeebebbbbbbeeebbebeebebbeeeebbbbeeebeeebeebeee----------eebebbb---ebbbbbbebeebeebebbbbeb:    

queryA       890:ESFVVEDIATGVQTLYSKW: 908
                :  ***          * **:
7niq_A_1     985:RNFVVNFKNNSPKKQYKKW:1003
SecStr          :GG EEEESSS      SSG:    
ExpBur          :ebbbbeeeeeeeeebbeee:

Protein Model on 7niq_A_1_D_1 (TEMPLATE: 7niq )

Input Residue Numbers for Focused Sites