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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [627 aa] | LGP2 :G0YYQ5_CHICK | |
2 | b | D 1 (A) | non-polymer(ZN) | ZINC ION | 810C 813C 864C 869C (identity: 100.0 %/33.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5jbj_A_1 identity=33.5% |
queryA 245:NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVYEQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENN: 341 : **** ** * * * *** *** * ** * * * * * * * * ** ** * : 5jbj_A_1 11:GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLVQQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGS: 103 SecStr :HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHH----HT SS EEEEESSSHHHHHH---HHHTGGGGGGTS EEEE STT SSS HHHHHHH : ExpBur :eebeebbebbeeeebbbbbbeeeeebbebbbbbbbebb----eeeeebbbbbbbeeeebbeeb---beebbeebeeebebeebbbeeeeeeebbeebeeb: queryA 342:DIIILTPQILVNNLKKGTIPS---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASV: 438 :* * * *** * * * * * * **** * * ** ** ** ** * *** ***** * * * * ** ** *: 5jbj_A_1 104:DVVICTAQILQNALLSGEEEARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGETSFEGAVEHILQICANLDTEV: 202 SecStr :SEEEEEHHHHHHHHH SSTTT STT SEEEEETGGG STT HHHHHHHHHHHHHHTT - EEEEEES SS SHHHHHHHHHHHHHHTT SE: ExpBur :ebbbbbbebbbebbeeeeeebebebeebbbbbbbebbebeeeeebbebbbebbeeeeeeee-ebbbbbbbbbebbeeeeeeeebbbebbbebbbbbbbee: queryA 439:IATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL: 538 :** * * * * * * ** **** *** ** * * * : 5jbj_A_1 203:IASAXXXXXXXXXXXXXXXXXXXXXXXREQDPFGQRLKKIM-------AQIQEHMEMPELPQN--FGTQVYEQRIV---------ELENRAAE-RFCRKT: 283 SecStr :EE ----------------------- HHHHHHHHHH-------HHHHHHHT SS -- SSHHHHHHHH---------HHHHHHHH-HT HHH: ExpBur :bbee-----------------------eeeeebbeebeebb-------eebbeebeeeebbee--beeeebbeebe---------ebbeebbe-eeeeeb: queryA 539:FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRA: 638 : *** ***** * ** ** * * * * * *** * * ** * * **** * * *** : 5jbj_A_1 284:RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXXDPTERFLATTFEENRATLQALAGDQRYXNPRLSKLEEILQEHFQPPGSSRGIVFTKTRQ: 382 SecStr :HHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHT- ---- HHHHHHHHHHHHHHHHHHHHHH S - HHHHHHHHHHHHHT STT EEEE SSHH: ExpBur :bbbbebbeebbbbbebbeebbbebbbebbeeebee-e----eebeeebeebbeebeeebeebbeeeeb-bebbeebeebbeeebeeeeebbbbbbbeeee: queryA 639:LVDALKNWIEGNPKL--SFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGS: 736 : * * * *** * ** *** * * * * * **** ** ** ** * * * * * * ** ** *: 5jbj_A_1 383:SAHSLLSWLQDTAGLCGQHIRAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQAQGRARAQNS: 481 SecStr :HHHHHHHHHHT TTTTTS EEEE S B SS B HHHHHHHHHHHH-TTS EEEE TTSSSS TT EEEE S HHHHHHHHTT SSS : ExpBur :bbebbeebbeebeebeebebeebbbbeeeeeeeeeebeeeebeebbeebe-eeebbbbbbbeebbeebebeebebbbbbebeeeeebeeebeebbeeeee: queryA 737:KCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC: 829 : * * * * * * * ** * * * * ** * * * * * * : 5jbj_A_1 482:MYSVLAKANXXXXXXXXXXXXXXXLMERAIRAVQAMPERKYRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM: 579 SecStr : B --------------- HHHHHHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS TT--T EEEETTT EEEEGGGEEEETTT: ExpBur :eeeebeeee---------------ebeebbeebeeeeeeebeeebeebbeebbeebeeeeeeeeeeeeebebe--ebebbbbebbeebbebebbbbbeee: Contact : b b queryA 830:HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHF: 913 :* * * * * * * * ** * * * *** * ** *: 5jbj_A_1 580:HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPILSIKNFVV--VTPDEKKKYKKWSTVTF: 661 SecStr :EEEE GGGGGTEEEEEEE S- SS EEEEEEET--TT EEEEEEEETTEEEEEE GGGEEE--E SS EE S STT SS: ExpBur :ebbbbeeebeeebeeeeeeeeee-eeeeebebbbebbbe--eeeeebebbbebeebebbbbebebbbb--bbeeeeeebeebeebbb: Contact : b b |