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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [523 aa] | RETINOIC ACID INDUCIBLE PROTEIN I :D3TI84_ANAPL | |
2 | b | D 1 (S) | polymer(polyribonucleotide) | 5'-R(*UP*CP*AP*AP*AP*CP*AP*GP*AP*GP*GP*UP*CP*GP *CP*AP*UP*GP*C)-3' | 298N(T) 299Q(K) 300I(V) 301P 325S 326G 329A(F) 347T 349Q 350I 353N 510E 511Q(H) 514V 518K(R) 635K 636T 637R 662T(M) 663G 664R 697T 698S 699V (identity: 70.8 %/57.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4a36_A_1 identity=57.0% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341 :* * ** *** ** *** ****** ****** ****** * * * **** * ******* ** *** ** * **** ** ** * : 4a36_A_1 7:KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDS: 106 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHTT SS EEEEESSHHHHHHHHHHHHHHHTTTT EEEE TTTGGGS HHHHHHH : ExpBur :eeeebbebbbebbbeebbbbbbbebebebeebbbbbbeebbeebeeeeebbbbbbbbebbbbebbbeebeeebeeeebebebbbeeebeeeebeebbeeb: Contact : bbbb bb b queryA 342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441 :*** ******* ** **************** **** * ** ** * *** ********* *** * ** ** ** * *: 4a36_A_1 107:DIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSAS-QLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAIST: 205 SecStr :SEEEE HHHHHHHHHTSS GGG SEEEEETGGG TTSHHHHHHHHHHHHHHHH S- EEEEEES TT SSHHHHHHHHHHHHHHTT SEEE : ExpBur :bbbbbbbebbbebbeeebbeebeebbbbbbbbbbebeeeeebbebbeebbebeeeeee-ebbbbbbbbbbbbbeebeeeeebbeebbebbbebbbebbbb: Contact : b bb b queryA 442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541 :* * ** ** * * ** * ** ** ** * * **** ** *** * * ****** *** : 4a36_A_1 206:VRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTI-XXXXXXXXXXXXXFGTQNYEHWIVVTQRKCRXXXXXXXEEESRICRALFIC: 304 SecStr : TTHHHHHHH B B S HHHHHHHHHHHHHHHHHHT -------------- SHHHHHHHHHHHHHT ------- SHHHHHHHHHH: ExpBur :beeeeeebeeebeeeebeeeebeeeeeeebeebbeebbeebeeebeee--------------eeeeebeeebeebeeeee-------eeeeeebebbebb: Contact : bb b b queryA 542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641 :* ************* ** *** ** ** ** * ** ** * ** ** * * ******* * ** * ** * * ** ****** : 4a36_A_1 305:TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVS: 404 SecStr :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHTHHHHS HHHHHHHHHHHHSHHHHHHHHT SSSS HHHHHHHHHHHHHHHH TT EEEE SSHHHHH: ExpBur :bebbeebbbbbeebeebbbebbbeebeebbeebeeeeeeebbeebbeebeeeeeebeebbeeeebebbbbeebbebbbebbeeeeebbbbbbbeeeebbe: Contact : bbb queryA 642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741 :*** * ** * *** * *** **** ** ***** * * ************* ***** **** *** **** ****** **** * : 4a36_A_1 405:ALKKCMEENPILNYIKPGVLMGRGXXXXXXXMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILV: 504 SecStr :HHHHHHHT TTTTTS EEEE ------- HHHHHHHHHHHHH SSS EEEE GGGGSS TT EEEEES TTHHHHTGGG SS EEEEE: ExpBur :bbeebbeeeeebeebebbbbbeee-------eebeebeeebeebeeeeebbbbbbbebbbbbbebeebebbbbbbbeeebbebbbbbbbbbeeeeebbbb: Contact : bbb bbb queryA 742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRD: 792 :** * * * * *** *** * *** * ** * * **: 4a36_A_1 505:TSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRD: 555 SecStr :B HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHGGG : ExpBur :bbeeebbeebeebeeebebbeebbeebeeeeeeebeeebeebbeeeeeeee: |