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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 2 (A) | polymer(polypeptide(L)) [640 aa] | Isoform 2 of Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE | |
2 | b | C 2 (Y) | polymer(polyribonucleotide) | RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3') | 298N 299Q(K) 300I(V) 326G 347T 349Q 350I 353N 510E 511Q 635K 636T 637R 662T(I) 663G 664R(A) 668N(S) 697T 698S(T) 699V 827E 829C(M) 879Y(H) 906S(K) (identity: 62.5 %/35.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bkq_A_2 identity=35.6% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341 :* ** * * ** *** *** *** *** * * ** * * *** * ** * * ** * ** * * : 7bkq_A_2 4:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 102 SecStr : HHHHHHHGGGGGT EE TTS HHHHHHHHHHHHHHHHHHHT EEEEESSHHHHHHHHHHTHHHHHTT-TS B SSS SS HHHHHHS : ExpBur :eebbeebbebbbeeebbbbbbeeebebeebbbebbbebbeebeeeeeebbbbbbbeeebbbeebeeebbeeebee-ebebbebbeeeeeeeebbebbeee: Contact : bbb b queryA 342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428 :* ** * *** * ** * ** * * * **** * * ** ** ** *** **** ***** *** ** ** * : 7bkq_A_2 103:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 202 SecStr :SEEEEEHHHHHHHHHHHHTTS TTT SEEEEB GGGTTSS HHHHHHHHHHHHHHHHHHHHHH S EE EES S SSHHHHHHHHH: ExpBur :ebbbbbbeebbebbeeeeeeeeeebebbebbbbbbbbbbebeeeeebbbbbbbbbebbbebeeeeeeeeeeeeebbbbbbbeebbbeebeeeeebeebbb: Contact : b bb b queryA 429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528 : ** *** * *** ** * * ** * **** **** * * : 7bkq_A_2 203:NICANLDAFTIKTVKENLGQLKHQIKXXXXKFVIAXXXXXNPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 288 SecStr :HHHHHHT S SS HHHHHHH ---- ----- HHHHHHHHHHHHHHHHHT SS---------- SSSHHHHHHHHHHHHHH----HTTT: ExpBur :ebbbbbbbebbeebeeeeeebeeeee----eeeee-----eebeeebeebbeebbebbebebeb----------eeeeeebbebbeebbeeb----beeb: Contact : bb queryA 529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------------------------DEIEQDLTQRFEEKLQELE: 598 : * * ****** ** * ** ** * * * ** * * * : 7bkq_A_2 289:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDXXXXXXXXXXXXXXXXXXXXXXXKLDETDEFLMNLFFDNKKMLK: 382 SecStr : TTTHHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHH ----------------------- HHHHHHHHHHHHHHHHHH: ExpBur :eeeebbb------bebbebbbbbbebbeebbbebbbebbeebbebbeebbebbeee-----------------------eeeebbeebbebbeeebeebe: queryA 599:SVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILI: 695 : * ** * * * * *** ** ** * * * * * * ** ** * * * **: 7bkq_A_2 383:KLAENPXXXXEKLIKLRNTILEQFTRSXXSSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLI: 481 SecStr :HHHH ---- HHHHHHHHHHHHTTT -- EE S SHHHHHHHHHHHH HHHHHTT EEE S SSS HHHHHHHHHHHH-HTS SEEE: ExpBur :eebeee----eebeebeebbbebbeee--eebbbbbbeebebbbbbbebbeeeeebeeeebeebbbbbeeeeeeeeebeeeebeebbeebe-eeebebbb: Contact : bbb bbb b queryA 696:ATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR: 791 :** ** ** ** ** ** * * * * * * * **** * * * *** * ** : 7bkq_A_2 482:ATTVAEEGLDIKECNIVIRYGLXXXXXXXXXXXXXXXXXXSTYVLVTXXXXXXXEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMK: 581 SecStr :BSSGGGTTS S S EEEE ------------------ EEEE ------- HHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbebbeeebebeebebbbebee------------------eeebbbe-------eeeeeeeeeeebbeebbeebbebeeeebeeebeebbeebbeeeeee: Contact : bbb queryA 792:DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-KPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKI: 889 : * * *** * * * *** * ** * * * * ** * * **: 7bkq_A_2 582:VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXXNGEIIC---KCGQAWGTMMVHKGLDLPCLKI: 678 SecStr :HHHHHHH S EEEETTTTEEEEESSS EEETTTEEE STTTTTT EEE ----------- EEE ---TTS EEEEEEE SSSEEEEE G: ExpBur :eeeeeeeeeeeeeeebebbbbbeeeebbbbeebbbbeeeebbbbeeebeeebbebeee-----------ebebbb---ebbbbbbebbeeeeeebbbbeb: Contact : b b b queryA 890:ESFVVEDIATGVQTLYSKW: 908 : *** * **: 7bkq_A_2 679:RNFVVNFKNNSPKKQYKKW: 697 SecStr :GGEEE TT SSG: ExpBur :eebbbebeeeeebeebeeb: Contact : b |