[pdbjlvh2]Protein Model on 8dvu_A_1_C

Protein Model on 8dvu_A_1_C_1 (TEMPLATE: 8dvu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [669 aa]	Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2	b		C 1 (A)	non-polymer(ZN)	ZINC ION	810C 813C 864C 869C (identity: 100.0 %/98.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8dvu_A_1 identity=98.1%

queryA       240:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :****************************************************************************************************:
8dvu_A_1     240:PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
SecStr          :     HHHHHHSTTGGGT  EE    TTS HHHHHHHHHHHHHHSS TT    EEEE SSHHHHHHHHHHHHHHHTTTT  EEEE SSS S S HHHHHT:    
ExpBur          :eeeeeebbebbbebbeeeebbbbbbeeebebebbbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebbebbeeeebebebbbeeeeeeeebeebbe:    

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :****************************************************************************************************:
8dvu_A_1     340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
SecStr          :T SEEEE HHHHHHHHHTTSS  GGG SEEEEETGGG SSS HHHHHHHHHHHHHTTS  S   EEEEE S    TT  SHHHHHHHHHHHHHHTT  B :    
ExpBur          :ebbbbbbbbebbbebbeeeebeebeebebbbbbbbbbbeeeeebbebbbebbebebeeeeeeebbbbbbbbbbbbeebeeeeebbeebbebbbbbbbbbb:    

queryA       440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
                :****************************************************************************************************:
8dvu_A_1     440:ATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF: 539
SecStr          :   SSSHHHHTTT    EEEEEE    S  HHHHHHHHHHHHHHHHHHHHHS GGGS    S  TTSHHHHHHHHHHHHHHHS   S HHHHHHHHHHHH:    
ExpBur          :bbbeeeeeebeeebeebebeeeebeebeeeebeebbbebbeebbebbeeeeeebeeebeeeebebbeeebeebbeebbeebbeeeeeeeeebbebbbbbb:    

queryA       540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 639
                :****************************************************************************************************:
8dvu_A_1     540:LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL: 639
SecStr          :HHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHHS SSS  HHHHHHHHHHHHHHHH TT  B  B SSHHH:    
ExpBur          :bbbbbbebbbbbbeebeebbbebbbebbeebbeebeeebeeebbeebbeebeeebeebbebbeeeebebbbbebbbebbeebbeeeeebbbbbbbeebeb:    

queryA       640:VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 739
                :****************************************************************************************************:
8dvu_A_1     640:VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCF: 739
SecStr          :HHHHHHHHHT SS TT  EEEE  SS  SS     HHHHHHHHHH SSSSS SEEEE SSSSSS      SB  EES    HHHHHHHHTT  STT EEE:    
ExpBur          :bebbeebbeebeebeebebbbbbbeeeeeeeeebeeeebeeebebbeeeeeebbbbbbeebbebbebeebebbbbbbbbeebbbbbbbbebbbbeebebb:    

queryA       740:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 839
                :****************************************************************************************************:
8dvu_A_1     740:LLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK: 839
SecStr          :EEESSTTHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHTT          S EEEEESSS  EEEEGGGEEESSSS  EE  STTT:    
ExpBur          :bbbbeebbbeebeebeeebebbeebbeebeeeeeeebeeebeebbeeebeebeeeeeeeeeeeeeebebbbbbbbbebbebeebebbeeeebbbeeeebe:    
Contact         :                                                                      b  b                          

queryA       840:ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA: 921
                :******             ***************************************************************:
8dvu_A_1     840:ECFVSRXXXXXXXXXXXXXRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA: 921
SecStr          :TTEEE -------------  EEEE STT   EEEEE   SS   EEE GGGEEEEESSS      SSTTT  S  EE    :    
ExpBur          :eebeee-------------eeebbbeeebbbbebbebbeeeeeebbbbebebbbbbbeeeeebeebeebeebebeeeebeee:    
Contact         :                        b    b

Protein Model on 8dvu_A_1_C_1 (TEMPLATE: 8dvu )

Input Residue Numbers for Focused Sites