Protein Model on 6h66_A_1_C_1
(TEMPLATE: 
6h66
)Protein Model on 6h66_A_1_C_1
(TEMPLATE: 6h66
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [667 aa] | Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE | |
| 2 | b | C 1 (Y) | polymer(polyribonucleotide) | RNA (5'-R(P*CP*GP*UP*CP*AP*UP*GP*CP*GP*CP*AP*UP*GP*GP*A)-3') | 298N 299Q(K) 300I(V) 325S 326G 347T 349Q 353N 510E 511Q 635K 636T 637R 662T(I) 663G 664R(A) 668N(S) 675L(Q) 697T 698S(T) 699V 827E 829C(M) 906S(K) (identity: 62.5 %/38.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6h66_A_1 identity=38.0% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
:* ** * * ** *** *** *** *** * * ** * * *** * ** * * ** * ** * * :
6h66_A_1 310:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 408
SecStr : HHHHHHHGGGGSS EE TTS HHHHHHHHHHHHHHHHHHHT EEEEESSHHHHHHHHHHTHHHHHTT-TS EE SSS SS HHHHHHS :
ExpBur :eebbeebbebbeeeeebbbbbeeebebbebbbebbbebbeebeeeeeebbbbbbbeebbbbeebeeebbeeebee-ebebbebbeeeeeeeebbebbebe:
Contact : bbb bb
queryA 342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428
:* ** * *** * ** * ** * * * **** * * ** ** ** *** **** ***** *** ** ** * :
6h66_A_1 409:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 508
SecStr :SEEEEEHHHHHHHHHHHHHT SS GGG SEEEES GGG STT TTHHHHHHHHHHHHHHHHHHHHT EEEE S SS SSHHHHHHHHH:
ExpBur :ebbbbbbeebbebbeeeeeeeeebbebeebbbbbbbbbbebeeebebbbbbbbbbeebeebeeeeeeeeeeeeebbbbbbbbbbbbeebeeeeebbebbb:
Contact : b b b
queryA 429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528
: ** *** * *** ** * * * * ** * **** **** * * :
6h66_A_1 509:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXXNPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 594
SecStr :HHHHHHT S TTHHHHHHH B ----- HHHHHHHHHHHHHHHHHT SS---------- SSSHHHHHHHHHHHHHH----HTTT:
ExpBur :ebbbbbbbeebebbeeeeebbeeebeeeeeeeeee-----eebeeebeebbeebbeebebebee----------eeeeeebbebbeeebeeb----beee:
Contact : bb
queryA 529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCF: 616
: * * ****** ** * ** ** * * * ** * * * * ** * :
6h66_A_1 595:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXXXKLDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRN: 688
SecStr : SSSSHH------HHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHTT ---- HHHHHHHHHHHHHHHHHHHHHT --- HHHHHHH:
ExpBur :eeebbbb------bebbebbbbbbebbeebbbebbbebbbebbeebeebbebeeeee----eeeebbbebbeebeebeeebeeebeeee---ebbeebee:
queryA 617:ILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLSF--LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVI: 713
: * * * * *** ** ** * * * * * * ** ** * * * **** ** ** ** ** **:
6h66_A_1 689:TILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKXXXVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVI: 787
SecStr :HHHHHHHHHSS EE S SHHHHHHHHHHHHS --- EEE S TTS HHHHHHHHHHHH-HTSS EEE THHHHH SB :
ExpBur :bbeebbeeeeeebebbbbbeebebbebbeebbeeeeb---eebeeebbbbeeeeeeeeebeeeebeebbeebe-ebebbbbbbbebbbebbebbebbbbb:
Contact : bbb bbb b b bbb
queryA 714:LYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL: 808
: * * * * * *** ** * * ** ** * * * **** * * * *** * ** * * *:
6h66_A_1 788:RYGLXXNEIAMVQARGRARADESTYVLVTSSXXGVTEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL: 887
SecStr : B -- HHHHHHHHHHB SSS B B -- HHHHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHH S E:
ExpBur :bbee--ebbbbbbbbebbeeeebbbbbbbee--ebeeebeebeeebebbeebbeebeeeeeeebeeebeebbeebbeeeeeeeeeeeeeeeeeeeeebeb:
queryA 809:LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSK: 907
:** * * * *** * ** * * * * ** * * ** *** * *:
6h66_A_1 888:LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKK: 984
SecStr :E SSS EEE SSS EEETTTEEE STTTTTT EEE ---------- EEE ---SSS EEEEEEEETTEEEEEE GGG EE SS S B SS:
ExpBur :bbbbeeeebbbbeebebbeeeebbbbeeebeeebeebeee----------eebebbb---ebbbbbbebbebeebebbbbebeebbbebeeeeebeebee:
Contact : b b b
queryA 908:W: 908
:*:
6h66_A_1 985:W: 985
SecStr :G:
ExpBur :b:
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[assembly_id:1]
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