[pdbjlvh2]Protein Model on 8dgj_A_1_B

Protein Model on 8dgj_A_1_B_1 (TEMPLATE: 8dgj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1581 aa]	Endoribonuclease Dcr-1 :DCR1_DROME
2	b		B 1 (N)	polymer(polypeptide(L)) [108 aa]	Loquacious, isoform B :Q9VJY9_DROME	482T(H) 485L(F) (identity: 0.0 %/23.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8dgj_A_1 identity=23.7%

queryA       241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVE: 339
                :* **  * **   *    *****      * *  *               * * *             *           **           *      :
8dgj_A_1      15:FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCEVGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWT: 109
SecStr          :     TTTHHHHHHHH-S EEEE S HHHHHHHHHHHHHHHHHH--HHHTT EEEEE SS SS SS  HHHHHHHSSSS  E--EE  TTS    SSTTT:    
ExpBur          :eebbbebbbbbbbbbe-bebbbbbebbebbbbbbbbbbbbbbbb--bbeeebbbbbbbeebbeeeeebbbebbbbebbbbeb--ebbbeeeeeeeeebbe:    

queryA       340:NNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVI: 439
                :     ** *      *       **   *     **       *  *                *   **      *        *       * *  ** :
8dgj_A_1     110:DYHVSILRPEGFLYLLETREL-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHSAGCELQQLSAMLATLEQSVL: 200
SecStr          :S SEEEE HHHHHHHHHTTSS- GGGEEEEEETTTTSHHH---HHHHHHHHHHTTTTS TTS  EEEEE-----ES GGG SS HHHHHHHHHHHHHHSS:    
ExpBur          :eebbbbbebeebeebbeeeeb-ebeebbbbbbbebbbeeb---beebeebbeebbeebeeeeebbbbbb-----bbbbbbbebebebbebbbeebeebbe:    

queryA       440:ATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKA: 537
                :              *   *            *      *       *                                                     :
8dgj_A_1     201:CQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKSF----------------------------------------------------: 248
SecStr          :SEEE  SHHHHHHHSS   EEEEEE       HHHHHHHHHHHHHHHH----------------------------------------------------:    
ExpBur          :bebbbbbebbbbbbbbeebebebbebeeeeeeebbeebbebbeebbee----------------------------------------------------:    
Contact         :                                            b  b                                                    

queryA       538:LFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVK--: 635
                :                                                                                                    :
8dgj_A_1     249:--------------------------------------------------------------------------------------------------LL: 250
SecStr          :--------------------------------------------------------------------------------------------------HH:    
ExpBur          :--------------------------------------------------------------------------------------------------be:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
8dgj_A_1     251:DHRYDPYEIYGTDQFMDELKDIPDPKVDPLNVINSLLVVLHEMGPWCTQRAAHHFYQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLGSG: 350
SecStr          :T    STTTT  TT HHHHHHS  SSHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHH  SSHHHHHHHHHHHHHHHHHHHHHHHHHSS  TT:    
ExpBur          :eeeeebeeeeeeeeeeeebeebeebeeebeebbeebeebbeebbbbbbbebbeebeeebeeebeebeeeebeebbbebbebbeebeeebeebbeeeeeee:    
Contact         :bbb    bb                                           b  bb  bb b      b     bb  b  bb bbb bb         

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
8dgj_A_1     351:SDSRQTIERYSSPKVRRLLQTLRCFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 450
SecStr          :  THHHHHHHS HHHHHHHHHHHT  --------------------------------------------------------------------------:    
ExpBur          :eebbebbbebbbbbbebbbebbeeee--------------------------------------------------------------------------:    

queryA       636:------------------------------------------------------TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPA: 677
                :                                                       * *   *       * * **     * *                 :
8dgj_A_1     451:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRR: 550
SecStr          :-----------------------------------------   EEE  SSHHHHHHHHHHHHHHHTT STT S  EEE  S    TTT  HHHHHHHHH:    
ExpBur          :-----------------------------------------ebebbbbbeeebbbebbebbbbebeeebeebeebebbebbeebeeeeeeeeebeebeeb:    

queryA       678:QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS: 743
                :*   *  *    * * ** ***  ****   ****             *  ** **       *  :
8dgj_A_1     551:QEEVLKRFRMH-DCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA: 615
SecStr          :HHHHHHHHTTS-S  EEE  GGGSSSS     SEEEESS  SSHHHHHHHHHH  SSS EEEEEE :    
ExpBur          :beebeeebeee-ebbbbbbbebbbbeeebeebbbbbbbeebebbbbbbbbbbbbbeeebebbbbbe:

Protein Model on 8dgj_A_1_B_1 (TEMPLATE: 8dgj )

Input Residue Numbers for Focused Sites