[pdbjlvh2]Protein Model on 8dfv_A_1_B

Protein Model on 8dfv_A_1_B_1 (TEMPLATE: 8dfv )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1664 aa]	Endoribonuclease Dcr-1 :DCR1_DROME
2	b		B 1 (E)	polymer(polyribonucleotide)	RNA (60-MER)	234D (identity: 100.0 %/24.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8dfv_A_1 identity=24.1%

queryA       234:DTNLYSP-FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAEN: 331
                :* **    * **  * **   *    *****      * *  *               * * *             *           **          :
8dfv_A_1       7:DNNLHTTVFTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCEVGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQ: 101
SecStr          :TT S SSS     HHHHHHHHHHH-S  B   S HHHHHHHHHHHHHHHHHH--HTTT  EEEEE TT SSSSS  HHHHHHHHSSSS B--    TT  :    
ExpBur          :eeeeeeebbbbbebbbbbbbbbee-bebbbbbbbbebbbbbbbbbbbbbbbe--beeeeebbbbbbbebeeeeeebebebbbeebbebeb--bbbeeebe:    
Contact         :b                                                                                                   

queryA       332:VPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLC: 431
                : *           ** *      *       **   *     **       *  *                *   **      *        *       :
8dfv_A_1     102:IPFDHCWTDYHVSILRPEGFLYLLETREL-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHSAGCELQQLSAML: 192
SecStr          :  SS  GGG SB EE HHHHHHHHHTTSS- TTTEEEE BS  SSHHH---HHHHHHHHTTTTTTS TTT  B  B -----   TTS  STTTTHHHHH:    
ExpBur          :eeeebebeebebbbbebebbbebbeeeeb-ebeebbbbbbbbbbebeb---beebbebbeebbeebeeeeebbbbbb-----bbbbbbbebebeebeebb:    

queryA       432:ASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKD: 529
                :* *  **               *   *            *      *       *                                             :
8dfv_A_1     193:ATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKSF--------------------------------------------: 248
SecStr          :HHHHHHTT       HHHHHHHSS   EE  EE       HHHHHHHHHHHHHHHH--------------------------------------------:    
ExpBur          :eebbebbbbebbbbbbbbbebbbbeebebbbbbbbeeeeeebbebbbeebbebebe--------------------------------------------:    

queryA       530:EESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETI: 629
                :                                                                                                    :
8dfv_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       630:TILFVK----------------------------------------------------------------------------------------------: 635
                :                                                                                                    :
8dfv_A_1     249:------LLDHRYDXXXXXXXXXXXXXXXXXXXXXXDPLNVINSLLVVLHEMGPWCTQRAAHHFYQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHA: 342
SecStr          :------HHH    ---------------------- HHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHTTS   HHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :------beeeeee----------------------ebeebbebbbebbbebbbbbbbebbeebeeebeeebeeeeeeeeeebbbbbbebbeebeebbeeb:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
8dfv_A_1     343:FHRHLXXXXXSRQTIERYSSPKVRRLLQTLRCFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 442
SecStr          :HSS  ----- HHHHHHHS HHHHHHHHHHHH  ------------------------------------------------------------------:    
ExpBur          :beeee-----eeebbeebbbbbbebbbebbeebe------------------------------------------------------------------:    

queryA       636:--------------------------------------------------------------TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQ: 669
                :                                                               * *   *       * * **     * *         :
8dfv_A_1     443:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPK: 542
SecStr          :-------------------------------------------------   B  B SSHHHHHHHHHHHHHHHTT SGGGS  EEE     S SSS HH:    
ExpBur          :-------------------------------------------------ebbbbbbbeeebbbebbebbbeebbeebeebeebebebbbeeeeeeeeeee:    

queryA       670:NTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS: 743
                :        *   *  *    * * ** ***  ****   ****             *  ** **       *  :
8dfv_A_1     543:EAELEHRRQEEVLKRFRMH-DCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA: 615
SecStr          :HHHHHHHHHHHHHHHHHSS-S SEEE  GGGTTT      SBEEESS  SSHHHHHHHHTT  SSS EEEEEE :    
ExpBur          :ebeebeeebbebbeebbee-ebbbbbbbeebbeebebbbbbbbbbbbebeebbbbbbbbbbbebeebbbbbbbb:

Protein Model on 8dfv_A_1_B_1 (TEMPLATE: 8dfv )

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