[pdbjlvh2]Protein Model on 7zpj_A_1_B

Protein Model on 7zpj_A_1_B_1 (TEMPLATE: 7zpj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RIGI_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [1280 aa]	Endoribonuclease Dicer :DICER_MOUSE
2	b		B 1 (B)	polymer(polyribonucleotide)	59-nt precursor of miR-15a	645N(R) (identity: 0.0 %/32.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7zpj_A_1 identity=32.3%

queryA       246:YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENN: 341
                :** ** * *    *** *  ** ****   *      *             **  *      ** *                   *        *     :
7zpj_A_1     100:YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKH: 198
SecStr          :HHHHH-HHHHHHS EEEE SSHHHHHHHHHHHHHHHGGGT S BTTB  EEEEEES HHHHHHHHHHHHHH SS EEEE  HHHHHT  HHHHHHHHHH :    
ExpBur          :ebeeb-bebbeeebbbbbbeeeebbbbbbbbbbbbebeebbeeeeeeeebbbbbbeeeeebeebbeebeebbbbebbebbeeeebeebeeeebeebbeee:    

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :   * *       ** *   ***   *  *****     ***  **      **  *    *   *****   *                          :
7zpj_A_1     199:QVLIMTCYVALTVLKNGYL-SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG--------------------------: 265
SecStr          :SEEEEEHHHHHHHHHHT S- TTTEEEEEEESGGGGTSS HHHHHH------HHHHHSSS    EEEE  TT  --------------------------:    
ExpBur          :bbbbbbbebbeebbeeeeb-ebeebbbbbbbbbbebeeebbbeebb------eebeebeeebebbbbbeebbee--------------------------:    

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :                                                                                                    :
7zpj_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-----------: 630
                :                                                                                                    :
7zpj_A_1     266:-----------------------------------------------------------------------------------------KCDPEELEEKI: 276
SecStr          :-----------------------------------------------------------------------------------------SSHHHHHHHHH:    
ExpBur          :-----------------------------------------------------------------------------------------eebeeebeeeb:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
7zpj_A_1     277:QKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAALDFINDCNVAVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAG: 376
SecStr          :HHHHHHHTSEEEE  HHHHHHHHT   EEEEEE      SSSHHHHHHHHHHHHHHHHHH      TTS  HHHHHHHHHHHHHHHHHHH HHHHHHHHH:    
ExpBur          :eebeebbebebebbbebbeebbeeeebeeeebebeeeeeeeebbeebbeebeebbeebeebeeeeeeeeebbbebbeebbebbeebbebbbbbbbbbbbe:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
7zpj_A_1     377:MMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYVTPKVMKLLEILRKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 476
SecStr          :HHHHHHHHHHTT   HHHHHHHHHHHHHHHHHHHHHHTTS TTS  GGGS HHHHHHHHHHHT ------------------------------------:    
ExpBur          :bbbeebeeebeeeeeeebeebbeebbebbeebeebbeeebeeeeebeebbbebbeebbebbeeb------------------------------------:    
Contact         :   b   b                                                                                            

queryA       631:----------------------ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCILDAFKASGDHNILIATSV: 699
                :                      * **  *     *   *       * *        *                    *   *  * *    * ******:
7zpj_A_1     477:XXXXXXXXXXXXXXXXXILCG-IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEVLRKFRAH-ETNLLIATSV: 574
SecStr          :-----------------   E-EEE S HHHHHHHHHHHHHHHHH TT  S  EEEE ---------------- THHHHHHHHHHHGG-GSSEEEE GG:    
ExpBur          :-----------------ebeb-bbbbeeeebbebbbebbebbbeebeebeeeebeebe----------------eeeeeeeeeebeeee-eeebbbbbee:    
Contact         :                                    b   b  b                                                        

queryA       700:ADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIE-KEQINMYK--EKMMND: 763
                :  ** **  ****             *  ** **  *    *          *    **  **    :
7zpj_A_1     575:VEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRN: 641
SecStr          :GGSS      SEEEE S  SSHHHHHHHHTT  SSS EEEEEE HHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbeebebeebbbbbbbeebeebebbbebbbbbebeebebbbbbeeeebeebeeeeeebeebbeebee:

Protein Model on 7zpj_A_1_B_1 (TEMPLATE: 7zpj )

Input Residue Numbers for Focused Sites