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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1476 aa] | Dicer-2, isoform A :A1ZAW0_DROME | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [16 aa] | Loquacious, isoform D :M9MRT5_DROME | 437S(E) 438V 439I(M) 440A(V) 443K(P) 445N(Q) 451Q 452V 453V(L) 454Y(T) 457Q(R) 505G 506T(I) 584Q(M) 585D(N) 586L(F) 587T(S) 588Q 589R 598E(M) 601S(K) 602R(V) (identity: 27.3 %/29.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7w0f_A_1 identity=29.7% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335 :*** *** * * * *** ***** * * * ** * * ** * * * * *: 7w0f_A_1 7:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 105 SecStr : TTHHHH-HHHHHHS EEEE TTS HHHHHHHHHHHT SSSSS GGGT EEEEE S HHHHHHHHHHHHHT SS EEEE TTTTTTT HHHHHHH: ExpBur :eeeebbeeb-beebeeebbbbbbebebebebbbbbbbeeeeeebeeeeeeebebbbbbbeeeebbebbbebbeebbebebbebbeeeebeeeeeeebeeb: queryA 336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411 : * * * * ** * **** ** * * * ** * *** : 7w0f_A_1 106:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 196 SecStr :--HHH SEEEE HHHHHHHHHT-TSS GGGEEEEEEESGGG STT HHHHHHHHHHHS SS------S EEEEEESSS SS TTTHHHHHHHHHHHT: ExpBur :--beebebbbbbbebbbebbbb-ebbebebbbbbbbbbbbbbeeeeebbbbbbbbeeeeee------eebebbbbbebbbeeeebeebeebbeebbbbbb: queryA 412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500 : * * * * * * * *** * * * * * ** * * * * *: 7w0f_A_1 197:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 287 SecStr : EEE S HHHHHHHHGG-----G EEEEEEE ---- HHHHHHHHHHHHHHHHHHT B TTS SB HHHHHHHHHHHHHHHH: ExpBur :bebebbeeeeebeeebee-----beebeeeeebbeee----eeeeebbeebeebbeebbeebeeeebeeeeeeeeeebeeeeebeebeebbebbebbeeb: Contact : bbbb b b bbbb b queryA 501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594 : * * * * * * ** * * * * * *** : 7w0f_A_1 288:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 370 SecStr :HHHHBHHHHHHHHHHH---HHHHHHHHHT SHHHHHH---------HHHHHHHHHHHHHH-HHHHHHHS S HHHHHHHHHHHHB HHHHHH----: ExpBur :beebbbbbbbbbbebb---bbbbebeeeebbeeebeeb---------beebbebbeebbee-beeebeebeeeeeeeeebeeebbeebbeebbeeb----: Contact : bb bbbbb bb queryA 595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687 : * * ** * * ** * * * * * * * * ** * ** * : 7w0f_A_1 371:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 451 SecStr :--HHHHHHHHSS GG--G --------------EEEE S HHHHHHHHHHHHHHHHT HHHHTT EEEE SSS S SSS S S HHHHHH-: ExpBur :--bebbeebbeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbbbeeeebeeebeeeeeeeeeeebbebbe-: Contact : b bb queryA 688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744 : * * * ** **** ** * * * ** * * * * : 7w0f_A_1 452:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 508 SecStr :HTS EEEE GGGSSS SEEEE S HHHHHHHHHT STT EEEEEEES: ExpBur :eeebbbbbbbeebbbebebeebbbbbbbbebeebbbbbbbbebbbeeebebbbbbbe: |