CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1478 aa] | Dicer-2, isoform A :A1ZAW0_DROME | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [16 aa] | Loquacious, isoform D :M9MRT5_DROME | 436A(T) 437S(E) 438V 439I(M) 440A(V) 443K(P) 445N(Q) 451Q 452V 453V(L) 505G 506T(I) 566Y(K) 584Q(M) 585D(N) 586L(F) 587T(S) 588Q 589R 598E(M) 599S (identity: 33.3 %/29.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7w0a_A_1 identity=29.7% |
queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVE: 335 :*** *** * * * *** ***** * * * ** * * ** * * * * *: 7w0a_A_1 7:KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE: 105 SecStr : HHHHHH-HHHHHHS EEEE SSHHHHHHHHHHHHHT TTSSS GGGT EEEEEESSHHHHHHHHHHHHHHSSS EEEE GGGTGGG HHHHHHH: ExpBur :eeeebbeeb-beebeebbbbbbbeeeebbeebbbbbbeebeeebeeeeeeebebbbbbbeebebbebbbebbeeebebebbbbbeeeebeebeeeebeeb: queryA 336:QIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS----------------------: 411 : * * * * ** * **** ** * * * ** * *** : 7w0a_A_1 106:--IKKNQVLVGTAQVFLDMVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIKGNEITNVATKLKELEITYR: 196 SecStr :--HHH SEEEEEHHHHHHHHHT-TSS GGGEEEEEEESGGG STT HHHHHHHGGGTS GG------G EEEEEES S SS SSHHHHHHHHHHHTT: ExpBur :--beebbbbbbbbebbbebbbb-ebbebebbbbbbbbbbbbbeeeeebbbbbbbbeeeeee------eebebbbbbbbbbeeeebeebeeebeebbbbbb: queryA 412:---VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ: 500 : * * * * * * * *** * * * * * ** * * * * *: 7w0a_A_1 197:GNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ----EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ: 287 SecStr :SEEE SHHHHHHHTTT----- EEEEEEE ---- HHHHHHHHHHHHHHHHHTT S EE TTSSSEE HHHHHHHHHHHHHHHH: ExpBur :bbbbebeeeebeeebeeb-----beebeeeeeebeee----eeeeebbeebeeebeebbeebeebebeebeeebeeebeeeeeeeebebbbebbebbeeb: Contact : bbbbb b b bbb queryA 501:NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKL: 594 : * * * * * * ** * * * * * *** : 7w0a_A_1 288:MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRHL-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF----: 370 SecStr :HHHH HHHHHHHHHHH---HHHHHHHHHH SHHHHHH---------HHHHHHHHHHHHHH-HHHHHHTTGGG S HHHHHHHHHHHTS HHHHHH----: ExpBur :beebbbbbbbbbbebb---bbbbbbeeeebebeebeeb---------beebbebbeebeeb-beeebeebeeeeeeeeebbbebbbebbbebbeeb----: Contact : bb b bbbbbb bb queryA 595:QELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKA: 687 : * * ** * * ** * * * * * * * * ** * ** * : 7w0a_A_1 371:--LMSLKVSFADKDPK--DIC--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-: 451 SecStr :--HHHHHHHSSS GG--G --------------EEEE SSHHHHHHHHHHHHHHHTT TTTTTT EEEE SSS SS S S HHHHHH-: ExpBur :--bebbeebbeeeeee--ebb--------------bbbbbeeebbbbbbbbbbeebbebbeebeebbebbbbbeeeebbebeebeeeeeeeeebbebbe-: Contact : bb queryA 688:SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN: 744 : * * * ** **** ** * * * ** * * * * : 7w0a_A_1 452:DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD: 508 SecStr :HTS EEEESSSTTSSS SEEEE S HHHHHHHHTT STT EEEEEEEG: ExpBur :eeebbbbbbbeebbbebebeebebbbbbbebeebbbbbbbbebbeeeebebbbbbbe: |