Protein Model on 7to1_A_1_B_1 (TEMPLATE: 7to1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(RIGI_HUMAN) A 1 (A) polymer(polypeptide(L)) [635 aa] Antiviral innate immune response receptor RIG-I :DDX58_HUMAN
2 b B 1 (B) polymer(polyribonucleotide) p3SLR30 298N 300I 325S 326G 347T 349Q 350I 353N 379K 380Q 381H 499I 500Q 507Q 508K 510E 511Q 514V 518K 546R 635K 636T 637R 697T 698S 718V 750K 829C 830H 847H 851K 853F 854S 861K 874G 875I 888K 906S 907K 908W 909K (identity: 100.0 %/93.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7to1_A_1 identity=93.1%
queryA       242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
                :****************************************************************************************************:
7to1_A_1     242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341
SecStr          :   HHHHHHHHHHHTS  B  B S HHHHHHHHHHHHHHHHHSS TT     EEE SSHHHHHHHHHHHHHHTTTT        TTT SS  HHHHHHT :    
ExpBur          :eeeebbeebbeebeeeebbbbbbeeeebbbebbbbbbbebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeeeeeeebeebbeeb:    
Contact         :                                                        b b                        bb               

queryA       342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
                :****************************************************************************************************:
7to1_A_1     342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441
SecStr          :SS    HHHHHHHHHHSSS  STT SBEEEETGGG SSS HHHHHHHHHHHHHHTT   S  B  EEBS    SS  SHHHHHHHHHHHHHHTT SB   :    
ExpBur          :bbbbbbbebbbebeeeeebeebeebebbbbbebeebeeeebbbebbbebbebeeeeeeeeebbbbbbbeebebeebeeeeebbeebbebbbbbbbbebbb:    
Contact         :     b bb  b                         bbb                                                            

queryA       442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
                :****************************************************************************************************:
7to1_A_1     442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541
SecStr          : SS  TTGGGSS       EE    S  HHHHHHHHHHHHHHHHHTTT TTHHHH  SS   TTSHHHHHHHHHHHHHHTT   TTSSHHHHHHHHHHHH:    
ExpBur          :beebeeebeeebeeeeeeeeebeebeeeebeebbbebbeebbebbeeebeebeeebeeeeeebbeeebbebbeebbeebbebeeeeeeebbebbbbbbbb:    
Contact         :                                                         bb      bb bb  b   b                       

queryA       542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
                :****************************************************************************************************:
7to1_A_1     542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641
SecStr          :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHTT  SHHHHHHHHHHHHHHHHHHHHHT GGG  HHHHHHHHHHHHHHHH S   EEEE S HHHHH:    
ExpBur          :bebbeebbebbbbbebbebebbbeebeebbeeeeeebebebbeebbeebeeebeebeebbeeeebebebbeebbebbeebbeeeeebebbbbbeeeebbe:    
Contact         :    b                                                                                        bbb    

queryA       642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741
                :********************                            **********       ************            ***********:
7to1_A_1     642:ALKNWIEGNPKLSFLKPGILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXXXXXXXXXXXGRARGSKCFLL: 741
SecStr          :HHHHHHHH TT  S      ----------------------------   SEEES  -------    EEEEES  ------------  STT EEEEE:    
ExpBur          :bbeebbeebeebeebebbee----------------------------eeebebbeee-------eebbbbbbbbee------------ebeeebbbbbb:    
Contact         :                                                       bb                   b                       

queryA       742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841
                :****************************************************************************************************:
7to1_A_1     742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC: 841
SecStr          :ES HHHHHHHHHHHHHHHHHHHHHHHHHHS SHHHHHHHHHHHHHHHHHHHH          S  EEE SSS  EEEEGGGEEESSSS EEE  HHHHTS:    
ExpBur          :beeeebbeebeeeeebeebbeebbeebeeeeeeebeeebeebbeebbeebeeeeeeeeeeeeeebbbbbbbbbeebbebeebbbbeeeebbbebeebeeb:    
Contact         :        b                                                                              bb           

queryA       842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
                :**********************************************************************************:
7to1_A_1     842:FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM: 923
SecStr          :EEEEE SS    SS EEEEEEEE SSS   EEEEEEESSSSEEEEE GGG EEE SSS  EE  SSTTT  S  EE  TTT :    
ExpBur          :beeeebeeeeeeeebebebbbbbeeebbebebbbbbeeeeeebbbbebebbbbbbeeeeebebeeebeebebeeeebeeeee:    
Contact         :     b   b bb      b            bb            b                 bbbb

Input Residue Numbers for Focused Sites

ex) 2,15,123