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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [689 aa] | Interferon-induced helicase C domain-containing protein 1 :IFIH1_MOUSE | |
2 | b | B 1 (Z) | polymer(polyribonucleotide) | RNA (5'-R(P*CP*UP*CP*UP*CP*CP*UP*CP*GP*GP*CP*UP*UP*G)-3') | 298N 299Q(K) 300I(V) 326G 331N(K) 347T 349Q 353N 510E 514V(I) 635K 637R 663G 664R(A) 668N(S) 675L(Q) 697T 698S(T) 699V 829C(M) 830H 877V(M) 878K(V) 879Y(H) 880K (identity: 52.0 %/38.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bkp_A_1 identity=38.0% |
queryA 244:RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPVYEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341 :* ** * * ** *** *** *** *** * * ** * * *** * ** * * ** * ** * * : 7bkp_A_1 310:RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSY: 408 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHHHHHHTT EEEEES HHHHHHHHHHTTHHHHTT-TS EEE TTSSGGGGHHHHHHH : ExpBur :eebbebbbebbbeeebbbbbbebebebeebbbebbeebbeeeeeeeeebbbbbbbeeebbbebbeeeebeeebee-ebebbbbbeeeeeeeebbebbeee: Contact : bbb b b queryA 342:DIIILTPQILVN---NLKKGTIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGLTASVGVGDAKNTDEALDYIC: 428 :* ** * *** * ** * ** * * * **** * * ** ** ** *** **** ***** *** ** ** * : 7bkp_A_1 409:DVIISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGLTASPGVGAAKKQSEAEKHIL: 508 SecStr :SEEEEEHHHHHHHHHHHHTSSS GGG SEEEESSGGG STT HHHHHHHHHHHHHHHHHHHHHSSS EEEEEES S SSHHHHHHHHH: ExpBur :bbbbbbbebbbebbeeeeeeeeebbebeebbbbbbbbbbebeeeeebbebbbebbebbbebeeeeeeeeeeeeebbbbbbbbbbbbeebeeeeebeebbb: Contact : b b b queryA 429:KLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK: 528 : ** *** * *** ** * * * * ** * **** **** * * : 7bkp_A_1 509:NICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRENPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG: 594 SecStr :HHHHHTT S S HHHHHHHS EEEEEEE S HHHHHHHHHHHHHHHHTTT SS---------- TTSHHHHHHHHHHHHHH----HHHT: ExpBur :ebbbbbbbeebeebeeeeeebeeebeeeeeeeeebeeeebeebeebbeebbeebbeebeeebeb----------eeeeeebeeebeebbeeb----beee: Contact : b b queryA 529:DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------------------------------DEIEQDLTQRFEEKLQELE: 598 : * * ****** ** * ** ** * * * ** * * * : 7bkp_A_1 595:NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXXXXXXXXXXXXXXXXXXXSLKLDETDEFLMNLFFDNKKMLK: 688 SecStr : TTTHHH------HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHT -------------------- HHHHHHHHHHHTTHHHHH: ExpBur :eeebbbb------bebbebbbbbbebbeebbbebbbebbeebbebbeebeeebeeee--------------------eeeebebbeebbebbeebeeebe: queryA 599:SVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILI: 695 : * ** ** * * * * * *** ** ** * * * * * * ** ** * * * **: 7bkp_A_1 689:KLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINLLI: 787 SecStr :HHH TTS HHHHHHHHHHHHHHHHHTS EEEE S HHHHHHHHHHHHH HHHHHHT EEEE S SSS HHHHHHHHHHHH-HTS EEE: ExpBur :eebeeeebebbbbeebeebbeebbeebeeebbbbbbbeebebbebbbebbeeeeebeeeebeeebbbbeeeeeeeeebeeeebeebbeebe-eeebbbbb: Contact : b b bb b b queryA 696:ATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQ: 794 :** ** ** ** ** ** * * * * * * *** ** * * ** ** * * * *** * * * *** * : 7bkp_A_1 788:ATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQV-QSILEKKM: 886 SecStr :ESGGGSSS SEEEEES HHHHHHHHHT SSS EEEEEEESSSSHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHH-HHHHHHHH: ExpBur :bbebbbbbbebeebbbbbbbbbbeebbbbbbbeebbeeeebbbbbbbeeeeebbeebeebbeebeebeebbeebbebeeeebeeebeeebe-ebeeeeee: Contact : bbb queryA 795:EKPKPVPDKENKK-----LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIK: 888 : * *** * * * *** * ** * * * * * ** * * *: 7bkp_A_1 887:KVKRSIAXXYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXDYQTNGEIIC---KCGQAWGTMMVHKGLDLPCLK: 983 SecStr :HHHHTT -- GGG EEEESSS EEEETTSEEEETTTEEEE HHHHTS EE HHHH --- S EEE ---TTS EEEEEEEETTEEEEEE : ExpBur :eeeeeee--eeeeeeebbbbbbbbeeebbbbeebbbbeeeebbbbeeebeeebeebeeeeeee---eeeeebebbb---ebbbbbbebbebeeeebbbbe: Contact : bb bbbb queryA 889:IESFVVEDIATGVQTLYSKW: 908 :* *** * **: 7bkp_A_1 984:IRNFVVNFKNNSPKKQYKKW:1003 SecStr :GGGEEEE SSS B SSG: ExpBur :bebbbbebeeeeeeeebeeb: |