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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NCAP_SARS2) | A 1 (A) | polymer(polypeptide(L)) [138 aa] | Nucleocapsid protein :NCAP_IBVG | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [139 aa] | Nucleocapsid protein :NCAP_IBVG | 40R 41R(P) 42P 43Q(K) 44G(V) 46P(S) 47N(S) 48N(G) 49T(N) 88R 90A(Q) 91T(A) 92R 94I(F) 101M(R) 117P 150N(D) 152A(D) (identity: 27.8 %/40.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2gec_A_1 identity=40.7% |
queryA 40:RRPQGLPNNTASWFTALT--QHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEG: 137 :* * **** * ** * *** * * * ** ** * * * * ***** **** * * * *** *** *: 2gec_A_1 2:RPPKVGSSGNASWFQAIKAKKLNSPQPKF-EGSGVPDNENLKTSQQHGYWRRQAR-FKPGKGRRKPVPDAWYFYYTGTGPAADLNWGDSQDGIVWVAAKG: 99 SecStr : S SB EEESSTT B-SS TTS GGG EEEEEEEEE-EE SSS EEEEEEEEEEETT STTTTS TT TTEEEEE TT: ExpBur :eeeeeeeeeeebbbbbbebeeeebeebeb-eeebbbeeeebeeeebbbbbeeeee-eeeeeeeeeebeebbebbbbebbebeebeeeeeeebbbbbeeee: Contact :bbbbb bbbb b bbb b b b queryA 138:ALNTPKDHIGTRNPANNAAIVLQLPQG: 164 :* *** * * *: 2gec_A_1 100:ADVKSRSNQGTRDPDKFDQYPLRFSDG: 126 SecStr : TT S TTT B TT : ExpBur :eeeebebebebbeeeeeeeebbebeeb: Contact : b b |