Protein Model on 8umo_C_1_A_1 (TEMPLATE: 8umo )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(KLRD1_HUMAN) C 1 (J) polymer(polypeptide(L)) [115 aa] Killer cell lectin-like receptor, subfamily D, member 1 :E9Q3T9_MOUSE
2 b A 1 (A) polymer(polypeptide(L)) [278 aa] H-2 class I histocompatibility antigen, D-37 alpha chain :HA15_MOUSE 79Q(E) 110S(F) 112Q 113Q(T) 114F 154A(V) 160N(S) 164E 168D(N) 170N 171R (identity: 45.5 %/55.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8umo_C_1 identity=55.1%
queryA        58:CCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNP: 157
                :** *  ****  ******* * * *  **  **** ***** *   ** **  ** * ***  ***   ***** *   *  *           ** * *:
8umo_C_1       1:CCVCLDKWVGHQCNCYFISKEEKSWKRSRDFCASQNSSLLQPQSRNELSFMNFSQTFFWIGMHYSEKRNAWLWEDGTVPSKDLX-XXXXIRPEHCIVYSP:  99
SecStr          :     TT EEETTEEEEE SS B HHHHHHHHHHTTEEE    STTTTSTTTT    EE SEEEETTTTEEEETTS    S  ------  TTEEEEE T:    
ExpBur          :eeeeeeebeeeeeebbbebeeebbbeebeeebeeeebebbbbeeeebbeebeeeeeebbbbbebbeeeeebebeeeeeeeeee------eeeeebbbbbb:    
Contact         :                     b                              b bbb                                       b   

queryA       158:NGNALDESCEDKNRYICKQ: 176
                :      **** ******* :
8umo_C_1     100:SKSVSAESCENKNRYICKK: 118
SecStr          :TS EEEEETTS BEEEEEE:    
ExpBur          :eeeeeeeebeeebebbbee:    
Contact         :  b   b   b bb                                                                                      


Input Residue Numbers for Focused Sites

ex) 2,15,123