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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(KLRD1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [119 aa] | NKG2-D type II integral membrane protein :NKG2D_HUMAN | |
2 | b | C 1 (A) | non-polymer(VN8) | (3S,5aS,8aR)-3-benzyl-6-[(3,5-dichlorophenyl)methyl]-1,4-dimethyloctahydropyrrolo[3,2-e][1,4]diazepine-2,5-dione | 66V(I) 73Y 75I(F) 107F(L) 108M(L) 110S(L) 111S(V) 112Q(K) (identity: 12.5 %/33.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8ea5_B_1 identity=33.1% |
queryA 55:DSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIA: 154 : * * * * * *** * * * ** * ** *** * * ** * ** ** ** * * * : 8ea5_B_1 6:ESYCGPCPKNWICYKNNCYQFFDEEKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYHWMGLVHXXXXXXWQWEDGSSLSPNLLTIIE-MQKGDCAL: 104 SecStr : S TTSEEETTEEEEEEEEEE HHHHHHHHHTTT EE TTTTGGGGG S EEEEEE ------ EETTS B TTS EEEE-SSS SEEE: ExpBur :eeeeeebeeebeeeeebbbeebeeeeebeebeebbeeeebebbebebeeebeebeebeeebbbbbee------eebeeeeeeeeebbeeee-eeeeebbb: Contact : b b b bb bbb queryA 155:YNPNGNALDESCEDKNRYICKQQLI: 179 :* * * * *** * : 8ea5_B_1 105:YASSFKGYIENCSTPNTYICMQRTV: 129 SecStr :EETTTEEEEE TTS EEEEEEEE : ExpBur :bbeebebbbbebeeebbbbbbbeee: |